Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0390 ATGGGCTTGTTCTGTATGTTTGGTATTGAAGGAATTGGAAATGCTATGTCCTTTTCTGGGAAACTATTTTTATCTTTTAGTTTTGGATTTGTAACATCTAGAAAATTGCCTCGGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTACATATGTGAAAGCTCTGGTGAGAAGAGGTGAGGCACATGAAGAGCTTGAGTATTTTGAAGAGGGCATTGCTGGTGAGTTCAATTTTTCGTCTGATCATATTGAATATTGTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCGTCCGGAGATTGAAGCACAAAAAACTGGAGAAGATGAAGGAAGAAATGATTGGTAAACTGAAAGAAATGGGCAATTCTTTGTTAAAGATCCGAATTGAACACTGGTTCATATTACATCTCATTCCAACCTGA 465 0.3742 MGLFCMFGIEGIGNAMSFSGKLFLSFSFGFVTSRKLPRGKYEDTIKECTKALELNPTYVKALVRRGEAHEELEYFEEGIAGEFNFSSDHIEYCDMKKILEIDPSNDQARRTVRRLKHKKLEKMKEEMIGKLKEMGNSLLKIRIEHWFILHLIPT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0390 154 Coils Coil 105 125 - -
Alju05g0390 154 SUPERFAMILY TPR-like 38 115 IPR011990 GO:0005515
Alju05g0390 154 Gene3D Tetratricopeptide repeat domain 34 134 IPR011990 GO:0005515
Alju05g0390 154 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 38 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0390 Alju-ChrAlju05 6066539 6068769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0390 35 146 Calmodulin-binding Proteins AT3G25230 40.708 3.73e-10 55.5