Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0386 ATGGCGGAGACGAAGCTTTTCTCTCTCTACATTTTCATCTTCACCTTCTTATTCTGCAGCTACTACACCAACAAATCTATTGCCTTTGCAATCTCTTTGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGATGTGGAGCTTCTCTTGGGTAAAATCAGAGCTACTCTTCAAGGTAACGCCGATAATCTTGTTTTATCTTCATGGAATTCCTCGATACCGCTTTGTCAATGGAGGGGACTCAAATGGGTTTTCTCAAATGGCTCTCCCCTGTCATGCAATGACTTGTCTTCACCACAATGGGCTAATCTTTCGCTTTTCAGAGACCCCTCTTTACGTTTACTCTCTCTTCAGCTTCCTTCTGCGAATCTCTCTGGTTCGCTTCCTAGGGAGCTTTCAGAGTTTCCTATGCTTCAGAGTCTCTACCTCAACATCAATTCGTTGAAAGGGACAATTCCTATTGAGCTTGGGTATAGTTCCTCACTCAACGATGTCGTTTTGGATGACAATATGTTGAGTGGAGCTTTGCCACCATCGATCTGGAATTTGTGTGATAAACTCGTTTCGCTTAGACTCCATGGCAACATGTTTTCTGGGTCTCTTCCTGAACCGGCATTGCCTGAATCTTCTTGCAAGAATCTGCAATTTCTTGATTTGGGTAGCAACAACTTTTCTGGGGTTTTTCCTGAATTCATCTCACATTTTGGTGGGCTGAAACAGCTTGACTTGGGGAATAATTTGTTTACTGGTTCAATTCCTCAGAGCTTAGCTGGGCTAAATAGGCTAGAAAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTGCCTACTTTTGGTGAACCATCCAAATTTGGTGTGGAGGTTTTTGAAGGGAATAACCCTGGCTTGTGTGGGGTACCTTTAAGAGCTTGTAGTGGAACTCCTAGATTGAGCTCTGGTGCAGTTGCTGGTATAGTTATCACTCTCATGACTGCGGCTGTGGTTTTAGTTTCATTGCTTATTGGGTACATGCAAAATAAGAGAAGGAAGGGTAAGGGAGATAGTGAAGATGAATTAGAGGAAGATGAAGATGATGATGAAGAAAATGGTGGTGGTAATGGTGGTGCTATAGGTGGTGGTGGTGGTGAAGGGAAGCTTATGTTATTCCAAGGTGGTGAGAATTTGTCATTAGATGATGTGTTGAATGCGACGGGACAAGTTATGGAGAAGACAAGTTATGGGACTGTATATAAGGCAAAGCTTGCTGATGGAGGAACCATTGCTTTGAGGTTATTGAGAGAAGGTAGCTGTAAGGATAGGGCTTCGTGCTTGCCCGTTATTAAGCAATTGGGAAGGATTCGACATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAGAGGGGAGAGAAGCTTCTTATTTATGATTATCTTCCTCTCAGAACTCTTCATGATCTTTTACATGAAACTAAAGCCGGAAAACCAGTGCTGAACTGGGCCAGGCGACACAAGATTGCATTGGGAATAGCCAGGGGACTAGCATATCTTCATACCGGACTTGATGTTCCAATCACTCATGGGAATGTACGATCCAAGAACGTGCTAGTTGACGAGTTCTTCATTGCCAGGCTCACTGAGTTCGGGCTGGACAAACTAATGATTCCTGCTGTAGCTGATGAAACGGTGGCGCTCGCGAAGACTGACGGCTACAAGGCTCCAGAGCTTCAAAAGATGAAGAAATGCAACTCGAGGACCGATGTTTATGCATTTGGGATATTGCTGTTGGAGATATTGATAGGGAAGAAGCCGGGGAAGAACGGGAGGAGCGGGGAGGTCGTGGATCTGCCTTCGATGGTGAAAGTGGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAACTTCTGAAAGGGATAAGGAGCCCAATGGAAGATGGGTTGGTGCAAGCATTGAAGGTAGCAATGGGATGTTGTGCCCCAGTGGCTTCGGTGAGACCAAGCATGGAGGAAGTTGTGAGACAGTTGGAGGAAAATAGGCCCAGGAATAGGTCTGCTTTATATAGCCCTACAGAAACAAGAAGTGGCAGTGGCACCCCTTTTTGA 2091 0.4462 MAETKLFSLYIFIFTFLFCSYYTNKSIAFAISLPSSSSSSSSSSDVELLLGKIRATLQGNADNLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCNDLSSPQWANLSLFRDPSLRLLSLQLPSANLSGSLPRELSEFPMLQSLYLNINSLKGTIPIELGYSSSLNDVVLDDNMLSGALPPSIWNLCDKLVSLRLHGNMFSGSLPEPALPESSCKNLQFLDLGSNNFSGVFPEFISHFGGLKQLDLGNNLFTGSIPQSLAGLNRLEKLNLSHNNFSGVLPTFGEPSKFGVEVFEGNNPGLCGVPLRACSGTPRLSSGAVAGIVITLMTAAVVLVSLLIGYMQNKRRKGKGDSEDELEEDEDDDEENGGGNGGAIGGGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTSYGTVYKAKLADGGTIALRLLREGSCKDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFIARLTEFGLDKLMIPAVADETVALAKTDGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEVVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKVAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0386 696 Gene3D Ribonuclease Inhibitor 209 308 IPR032675 -
Alju05g0386 696 MobiDBLite consensus disorder prediction 677 696 - -
Alju05g0386 696 SUPERFAMILY L domain-like 91 304 - -
Alju05g0386 696 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 203 IPR046959 -
Alju05g0386 696 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Alju05g0386 696 Pfam Protein tyrosine and serine/threonine kinase 400 671 IPR001245 GO:0004672|GO:0006468
Alju05g0386 696 Gene3D Ribonuclease Inhibitor 44 208 IPR032675 -
Alju05g0386 696 Gene3D Transferase(Phosphotransferase) domain 1 475 684 - -
Alju05g0386 696 ProSiteProfiles Protein kinase domain profile. 396 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0386 696 SUPERFAMILY Protein kinase-like (PK-like) 402 672 IPR011009 -
Alju05g0386 696 Gene3D Phosphorylase Kinase; domain 1 381 472 - -
Alju05g0386 696 FunFam Leucine-rich repeat receptor-like protein kinase 211 305 - -
Alju05g0386 696 MobiDBLite consensus disorder prediction 343 373 - -
Alju05g0386 696 MobiDBLite consensus disorder prediction 672 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0386 Alju-ChrAlju05 6013044 6015861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0386 38 696 Receptor kinase-like Gene Family AT3G24660 74.697 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju05g0386 PK_Tyr_Ser-Thr 1.4e-25 CL0016