Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0381 ATGAATATTGGTGGGGTGGAACCGCCAGTAGGGGAAGTTGGAGATTTCTTTGAAGAAGAAGAAGAAACAGTTATGGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCACAATAATAACAACAATGTTAATAATAATAATAATGGGCATCACCACCAAGATCATCATCATTACGATGAGGATGATGATCTTCTTGCCGGTGTATTGGACGATACTGCTTCTCTGTTTTACGCCGACGATGACTTCCCTTGTCTTCCAGATTTCTCATCATGCATGTCGTCTTCTTCGTCTTCGTCTTCACCGCCGGCCGCCGCCACGGTCAAAAACACCGTCACTTGCGTCACCTCGTCTTCCAATACTTCGTCGTATGATTCGGCAGAGACTCCTCTCCTCCCGCCGCCGCCAAAACCGCCGGCAGCGGCGGCGGCGTTATCCTCCGCTGCATCTATAGAGATCTTGCAGCAGACGGATCGACAAGGTGGAGGCGCTGACGGCGGAGATTGTGTGTACATGGCGGACACAATTGGGAATATGGAACTGATGGAGAGCAACGAATTCTTCGATCCTTCATCAATCTTTGAGAATGAAGAGAATCTATTGGACGAGTTGACTCAGTATGACCTGGCGAATAACCTGCCAGAAGTAGAGGGACATGCAAGCGGTGGAATGATGGTATTACAGGAGGAACGGCAACAGAAACCGCCGCCACCGTTGGCGGCGGAGGCGGTGGTGACGGATGAAGAGATGAGCTCGGTGTTCTTGGAGTGGCTAAAGATGAACAAAGATAGCGTGTCGGCCAGTGATTTGAGGAGCGTGAGGCTGAAGAAGGCGACAATAGAATGTGCAGCAAAGAGACTTGGTGGAGGAAAAGAAGGCATGAAGCAATTACTGAAGCTAATTCTTCAATGGGTTCAAACCAGCCATCTTCAAAAGAAAAGAAGAATGGATTATCATGTTAATAATGATAATAATGACAATCTTTTCATGGCTGATCAGTTTCATCAGGATACCACAAAACCTACTTCTGATTTGAACCACCAACCTTCATTTGGAACGGAATGGATCTCTCAGCCTCCGCCGCCTTACGGGGTTGATCCGGCGGCTGCTGCTCTTGCCCCGCCGCCATTTTCGCAACCAGTGGTTGGGTACAGTAATAATAATAACATGGTAGACCCGTTTTCAAGTGAGTTTCAGGCGATGGATTCTACTCATTCATGGCCTCATTCTCAGTTCAGTGTTTACAATAACAACCACCCATTCGGGACGACGATGGCTGCAGTCACGGCATATGGCGGTTATGCGAACAATCAGTATCCTTATCAATATTTTCAGGGCAGCGCCGGCTTGGATAGATTGGGTCCATTGGCAACGAAAGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGAAGGAATGTATCTCATCATCAAAGGCACCACAATGTGCAAGAACAACAACAAAGCCAGCAGAATCAAACTAGTGATTATTGCACCGGTGCTGCTACAGCTGCCCCACCGCATGCAAATCCACCCAACTGGTTTTATTGGCCGCCGCCACCTGTGGCCGCCTCCAATGCTGGAGGAGCCACTTCTGTTGCGCCAGTGGCTCAGGCGGAGCCACCACCTTCCACAATGACTGGGAGAAATGCGAGGGATCGGAGTACGGCCATGCAATCTGAACAGAATCATCAACAAAGCCGAGTCTCATCAGATAAACGACAGGGATGGAAGTCTGAGAAGAACTTGAAGTTTCTTCTGCAGAAGGTGTTAAAGCAAAGCGATGTGGGCAATCTGGGGAGGATAGTGTTGCCAAAGAAAGAAGCAGAAACCCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCAATAGCAATGGAAGACATTGGAACTTGTCGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACTGGAGATTTTGTGAGAGCCAACGGACTCCAGGAAGGAGACTTCATAGTCATATATTCAGATGTCAAATGTGGGAAATATATGATAAGGGGAGTGAAGGTGAGGCAAGCAACAGGGGCGAAACCTGAGACGAAGAAAGCAGCAAAATCATCCCACAAGGTTAATGTTAATGGATCTGATAATCCATCTTCAGCCAACAAGAATGACAAAAAGCAATAA 2172 0.4774 MNIGGVEPPVGEVGDFFEEEEETVMAAVKEREIWLHNNNNNVNNNNNGHHHQDHHHYDEDDDLLAGVLDDTASLFYADDDFPCLPDFSSCMSSSSSSSSPPAAATVKNTVTCVTSSSNTSSYDSAETPLLPPPPKPPAAAAALSSAASIEILQQTDRQGGGADGGDCVYMADTIGNMELMESNEFFDPSSIFENEENLLDELTQYDLANNLPEVEGHASGGMMVLQEERQQKPPPPLAAEAVVTDEEMSSVFLEWLKMNKDSVSASDLRSVRLKKATIECAAKRLGGGKEGMKQLLKLILQWVQTSHLQKKRRMDYHVNNDNNDNLFMADQFHQDTTKPTSDLNHQPSFGTEWISQPPPPYGVDPAAAALAPPPFSQPVVGYSNNNNMVDPFSSEFQAMDSTHSWPHSQFSVYNNNHPFGTTMAAVTAYGGYANNQYPYQYFQGSAGLDRLGPLATKEARKKRMARQRRNVSHHQRHHNVQEQQQSQQNQTSDYCTGAATAAPPHANPPNWFYWPPPPVAASNAGGATSVAPVAQAEPPPSTMTGRNARDRSTAMQSEQNHQQSRVSSDKRQGWKSEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQATGAKPETKKAAKSSHKVNVNGSDNPSSANKNDKKQ 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0381 723 Gene3D - 574 692 IPR015300 -
Alju05g0381 723 FunFam B3 domain-containing transcription factor FUS3 580 695 - -
Alju05g0381 723 MobiDBLite consensus disorder prediction 115 139 - -
Alju05g0381 723 MobiDBLite consensus disorder prediction 702 716 - -
Alju05g0381 723 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 255 702 IPR044800 GO:0003700
Alju05g0381 723 Pfam B3 DNA binding domain 585 681 IPR003340 GO:0003677
Alju05g0381 723 CDD BfiI_C_EcoRII_N_B3 582 683 - -
Alju05g0381 723 ProSiteProfiles B3 DNA-binding domain profile. 584 686 IPR003340 GO:0003677
Alju05g0381 723 MobiDBLite consensus disorder prediction 461 475 - -
Alju05g0381 723 SMART B3_2 584 686 IPR003340 GO:0003677
Alju05g0381 723 MobiDBLite consensus disorder prediction 689 723 - -
Alju05g0381 723 SUPERFAMILY DNA-binding pseudobarrel domain 583 678 IPR015300 -
Alju05g0381 723 MobiDBLite consensus disorder prediction 540 563 - -
Alju05g0381 723 MobiDBLite consensus disorder prediction 458 573 - -
Alju05g0381 723 MobiDBLite consensus disorder prediction 481 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0381 Alju-ChrAlju05 5960378 5963664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0381 2 717 B3 DNA Binding Superfamily AT3G24650 43.233 3.28e-148 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju05g0381 B3 2.3e-17 CL0405