Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0367 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCCCAGAACAACTTATGATTTTGGAGCAACTGTATAGAAGTGGGATTAAAACTCCAAGTGCTCCACAAATCCAACACATAACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGCAAGAATGTGTTTTATTGGTTTCAGAATCATAAGGCTAGAGATAGACAGAAGCTCAGGAGGAAACTGAACAAGCAGCTTCAACTACAACAACAACAACAACAATATCAGATGCTAGCTCATCAATGCCAAGTGATTAATCATCAGGACGATAAGGCTCATCATCATCGCTGGTCTTTTGGTGGCTTTGATTCCTCTCCTGGTTCTTCATCAGCCCAACAAGTTCCTTTTTATAACCCACCTATCTTGTTTTCCCAGGGAGAGACACCATCAGAGACATGGAAGACGAGTGCGCAGAAGCAACAACAAAGTGAGGTGATGGATAGAACAAAGATGACGTCATCACTTTATTACAACAACACTGGTATGAGTAGTTATCGTTGGAGTGTTGCGGATGTTAATGAAGAATCCTCGTATTATTGTTCAAGCCGACCTCTCAAGACTCTTGACCTATTTCCAACTACTTCCTCCAAACTCAAACAAGACCCCTTTAAGACTTGA 648 0.4167 MSRAGSSRWSPTPEQLMILEQLYRSGIKTPSAPQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQQYQMLAHQCQVINHQDDKAHHHRWSFGGFDSSPGSSSAQQVPFYNPPILFSQGETPSETWKTSAQKQQQSEVMDRTKMTSSLYYNNTGMSSYRWSVADVNEESSYYCSSRPLKTLDLFPTTSSKLKQDPFKT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0367 215 MobiDBLite consensus disorder prediction 138 157 - -
Alju05g0367 215 Gene3D - 1 67 - -
Alju05g0367 215 SUPERFAMILY Homeodomain-like 4 69 IPR009057 -
Alju05g0367 215 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Alju05g0367 215 CDD homeodomain 8 67 IPR001356 GO:0003677
Alju05g0367 215 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 210 IPR044555 GO:0003700|GO:0099402
Alju05g0367 215 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Alju05g0367 215 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0367 Alju-ChrAlju05 5795825 5797117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0367 1 74 Wox Gene Family AT2G28610 79.730 8.10e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju05g0367 Homeodomain 1.8e-17 CL0123