Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0354 ATGGCTGAGGTGAAATCGGAGGAGTGTTGCCTGGAGAATAAACAAACTATTGCTGCTTCTAGCTCCTCTATATCTGAAAGCAGTGGCAGTGCTCTACCCAAGTCCCCTGGGATATGTAGTCCAACATCCACATCACCCGCTCATCGGAGAACTTCTGGCCCTATAAGGCGTGCAAAAGGTGGTTGGACAGCAGAAGAGGATGAGACACTAAGGAATGCTGTTGCAATTTTCAAGGGAAAGAATTGGAAGAAAATAGCTGAGTCTTTCCCTGATAGAACAGAAGTGCAATGTCTCCACAGATGGCAAAAAGTTCTTAACCCAGAACTTGTTAAAGGGCCTTGGACTCAGGAGGAGGATGATAAAATTGTTGAACTAGTGTCAAAATATGGGCCTACAAAATGGTCATTAATAGCCAAGTCCCTGCTTGGTCGTATAGGGAAACAGTGCCGAGAGCGATGGCACAACCATCTTAATCCTGACATAAAGAAGGATGCCTGGACTTCGGCAGAGGAATTAGCCATCATGGAGGCTCATAGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAGAAGTTGGATTTTTATTTAACTACTGGACATCTTCCACCAGTTTCAAAGAATAGTCCAAAAGTTGATGTCAAAGACAAAATAATATGCTCTGCAACAGAAACAATTCTTGGTAGTTCAAACAAAGTATTAGATGCATCTACTGAAACATCATCAGAATCTACAGAGATCAATAAGCAAGAAGATAGTGATAAGAATCACTCAAGGCTTTTAGCAGCAGCAAGAGATGTTCGTGATTCTTCAAATGTCCTTGCAAATGAACCTGCTGATTCTGACTGTATAGAATGCAAGCCCGAATCCTCCACTTTAGATTTAAGTTGCAGAAACTCAGAACCAATGTCAAGAGATAATTTTGGAATGAATGGTGAACAAACACATGAGAAATCTGGATTCCATGGCAACCTAGCAATTGAGCATTGTATAAATAATAGCAGGTTGTTCACAAAACCTTTTTCGCGGGAAGGTCCGACTTGTGGTTCTTTATGTTATGAGCCTCTGCAGATGGATAATTTGGGTCCTTTAGATTCTCTTTATTTAAATATCTTTTGTCTGCAAAATGACTACAGCTCTACTCCCATGATGTCTCCTGCTGGTTTGTTCACTCCACCTTGTGCGACGGATCATGAATTTTTCGAACAAACTCCTGAATCAATATTGAAAATGGCTGCTGAGGCTTACCCAAATACCCCTGCCATATTGAGGAAGAGAAGAACTGGAGTCCAGACCCAAGCCACTCCCAGTAAAGTTGTGAAAGTTGATGGAGAATCACATGCTTCTATTGGCCAGCAGAGAAATGAGAATAATACTGATTCTGAAATTGGGAGGTTCTCTGAGAGTCCAGCAAGCCATGGCCATGTCAATGGCCTTCCCAATAATAAAATTTTCAATGCATCTCCTCCCTACCGGTTAAGATCCAAGCGAACAGGAGTTGTCAAGTCAGTGGAGAAACAACTTGAGCTTGCATTTGACCAAGAAAAGCACGACGAAATCATGAGGAAAATGGGAAAGTCTTCAGCATAG 1647 0.4183 MAEVKSEECCLENKQTIAASSSSISESSGSALPKSPGICSPTSTSPAHRRTSGPIRRAKGGWTAEEDETLRNAVAIFKGKNWKKIAESFPDRTEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLLGRIGKQCRERWHNHLNPDIKKDAWTSAEELAIMEAHSIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLTTGHLPPVSKNSPKVDVKDKIICSATETILGSSNKVLDASTETSSESTEINKQEDSDKNHSRLLAAARDVRDSSNVLANEPADSDCIECKPESSTLDLSCRNSEPMSRDNFGMNGEQTHEKSGFHGNLAIEHCINNSRLFTKPFSREGPTCGSLCYEPLQMDNLGPLDSLYLNIFCLQNDYSSTPMMSPAGLFTPPCATDHEFFEQTPESILKMAAEAYPNTPAILRKRRTGVQTQATPSKVVKVDGESHASIGQQRNENNTDSEIGRFSESPASHGHVNGLPNNKIFNASPPYRLRSKRTGVVKSVEKQLELAFDQEKHDEIMRKMGKSSA 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0354 548 MobiDBLite consensus disorder prediction 251 275 - -
Alju05g0354 548 MobiDBLite consensus disorder prediction 467 485 - -
Alju05g0354 548 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Alju05g0354 548 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Alju05g0354 548 CDD SANT 113 157 IPR001005 -
Alju05g0354 548 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Alju05g0354 548 FunFam Transcriptional activator Myb isoform A 58 110 - -
Alju05g0354 548 Gene3D - 111 162 - -
Alju05g0354 548 Gene3D - 164 236 - -
Alju05g0354 548 MobiDBLite consensus disorder prediction 16 50 - -
Alju05g0354 548 CDD SANT 62 105 IPR001005 -
Alju05g0354 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Alju05g0354 548 MobiDBLite consensus disorder prediction 16 64 - -
Alju05g0354 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Alju05g0354 548 FunFam Transcription factor MYB3R-2 164 230 - -
Alju05g0354 548 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Alju05g0354 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Alju05g0354 548 MobiDBLite consensus disorder prediction 446 502 - -
Alju05g0354 548 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Alju05g0354 548 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Alju05g0354 548 Gene3D - 58 110 - -
Alju05g0354 548 PANTHER MYB PROTEIN-RELATED 59 131 - -
Alju05g0354 548 SMART sant 110 159 IPR001005 -
Alju05g0354 548 SMART sant 58 107 IPR001005 -
Alju05g0354 548 SMART sant 162 210 IPR001005 -
Alju05g0354 548 CDD SANT 165 208 IPR001005 -
Alju05g0354 548 FunFam Transcriptional activator Myb isoform A 111 163 - -
Alju05g0354 548 Pfam Myb-like DNA-binding domain 114 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0354 Alju-ChrAlju05 5718835 5722390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0354 2 538 MYB Transcription Factor Family AT3G09370 47.156 3.28e-142 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju05g0354 Myb_DNA-bind_6 2.4e-17 CL0123