Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0320 ATGGTTGACTTCTCAGCCATTTCAGAGAGAGTAGTGATGGAGGAATCAGCAACAATGGCAGCTTCTTATTGGTCAGATGGGTCGTCATCAGAAGAAGATGACCTCTTGAGAGAGCTTTTAGATTATCATAATTATCATAATGAATCTCCAGCTTTCTCCTCCAATAATATTGAACCCAACATATCAATAAGTTCATCTTCATCAGCTTCTTCCTCCACCATTATTAACTCCTTCATCTCCAACATTTATTCAGGTCCTACCATTTCTGATATTGAAAATGCCTTGTCATTCACCAGCCATACACAACAACATTCCCAAGACTTCTCCTTATCCAGGGTATCGATACTGGAGAGAGGACTAAGCAAGACAGAGAATAAGTATACTCTGAAAATGAAGTGCTTTGGGAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTACGGACAGAAATCAATTAAGAACAGTCCAAATCCTAGGAGCTATTATAGGTGCACTAATCCAAGGTGTAATGCCAAGAAGCAAGTTGAAAGATGCAATGAGGACCCAGACACTCTTATTATCACTTATGAAGGGCTTCATTTTCACTTTGCTTATCCATATTTGTTGATGACTACTCAGGCCCATGAATCTTCTCCACCACCAACAAAGAGGCCCAAGACCAATACGACCATTTCCGAGACCCAAGCCCATCAAGGCCCAAATGCACAAGAGTCAGATATGGTCCAGACTCAGGCCCAAGATATTAGTGTGGGATCGCAAGGGTTGCTTGAAGACATGGTGCCTTTGATGATTCGTAATCCTACAATTAGAAGTATAAATCCTTTGCAGTCTTAA 837 0.4122 MVDFSAISERVVMEESATMAASYWSDGSSSEEDDLLRELLDYHNYHNESPAFSSNNIEPNISISSSSSASSSTIINSFISNIYSGPTISDIENALSFTSHTQQHSQDFSLSRVSILERGLSKTENKYTLKMKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERCNEDPDTLIITYEGLHFHFAYPYLLMTTQAHESSPPPTKRPKTNTTISETQAHQGPNAQESDMVQTQAQDISVGSQGLLEDMVPLMIRNPTIRSINPLQS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0320 278 SMART WRKY_cls 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g0320 278 MobiDBLite consensus disorder prediction 208 245 - -
Alju05g0320 278 Gene3D WRKY domain 135 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g0320 278 ProSiteProfiles WRKY domain profile. 134 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g0320 278 SUPERFAMILY WRKY DNA-binding domain 137 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g0320 278 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g0320 278 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 230 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0320 Alju-ChrAlju05 5308802 5311033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0320 74 273 WRKY Transcription Factor Family AT5G43290 45.089 5.95e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju05g0320 WRKY 1.7e-25 CL0274