Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0312 ATGGCTCTTGAGATGATCAAAGAAAAGCATCATTCTAAGAAAGTAGATGTCTATAGCTTTTCCATAGTTCTATCGGAGCTCTTAACTGGACTAACTCCATTTCACAACATAACACCAGAACAAGCAGCTTTTGCAGTCTCCATCAAGTTATGGGATTCTGAAATTCAATTGAGAAACCTGATTGAAGCACTTGAATCGTTAAGGGAGGAAGAGTTCGATTTGGGGCTGTTCGCTTTGCTTTCTTCGACTTGTGAAATCTGGGTCGATGAATAG 273 0.3993 MALEMIKEKHHSKKVDVYSFSIVLSELLTGLTPFHNITPEQAAFAVSIKLWDSEIQLRNLIEALESLREEEFDLGLFALLSSTCEIWVDE 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0312 90 Pfam Protein tyrosine and serine/threonine kinase 1 45 IPR001245 GO:0004672|GO:0006468
Alju05g0312 90 SUPERFAMILY Protein kinase-like (PK-like) 1 49 IPR011009 -
Alju05g0312 90 Gene3D Transferase(Phosphotransferase) domain 1 1 83 - -
Alju05g0312 90 Coils Coil 50 70 - -
Alju05g0312 90 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0312 Alju-ChrAlju05 4966840 4967463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0312 1 49 MAP Kinase Kinase Kinase AT1G62400 67.347 4.82e-15 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju05g0312 PK_Tyr_Ser-Thr 2.3e-07 CL0016