Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0311 ATGAATGCGGGATCACAAAAAATCTTATCTTTTCTTTCCTTCACCAATGGAAATGACAATTATTATGACGTTGGTGCTTTTGGTGGTGACAACAATGGTACACTTTCAAAATTTGAGCCTCGCAAGTGGCATGCCGATGCAAGTGCGAAAAGAATCATCAAAGGGGTAGCTTCAGGATTGTGCTATCTGCATGAAGAATGGGAGAAAGTAGTAGTACATAGAGACATAAAAGCAAGCAATGTTCTGCTAGATTCGAAGTTGAATGGAAGGTTAGGAGATTTTGGTCTTGCAAGATTATACGATCATGGCACTGATCCTGCTACTACACATGTGGTCGGGACATTGGGATATCTGGCACCGGAGAACACAATAACAGGAAGAGCCACCACAAAGCCAAACATACGTCAAATTCTACAATATTTGAATATGGAAGTGTCTTTGCCTGATTTGCCATTACTAATGTCGTCTCCTTCTTGTTGTGGATTTACATGTGGGAGCCACCAAGACTTTGATGATATTCGAATGTCCTTTCCATCTTCAAGTGTGGATGGCTTTCACTCTCGTACTTCAGTACCTGAATCTATCCTCTCAGGTGGTCGTTGA 603 0.4163 MNAGSQKILSFLSFTNGNDNYYDVGAFGGDNNGTLSKFEPRKWHADASAKRIIKGVASGLCYLHEEWEKVVVHRDIKASNVLLDSKLNGRLGDFGLARLYDHGTDPATTHVVGTLGYLAPENTITGRATTKPNIRQILQYLNMEVSLPDLPLLMSSPSCCGFTCGSHQDFDDIRMSFPSSSVDGFHSRTSVPESILSGGR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0311 200 Pfam Protein kinase domain 8 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0311 200 PANTHER - 49 131 - -
Alju05g0311 200 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0311 200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 71 83 IPR008271 GO:0004672|GO:0006468
Alju05g0311 200 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0311 200 Gene3D Transferase(Phosphotransferase) domain 1 4 134 - -
Alju05g0311 200 FunFam - 31 120 - -
Alju05g0311 200 SUPERFAMILY Protein kinase-like (PK-like) 31 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0311 Alju-ChrAlju05 4893555 4895775 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0311 87 200 Receptor kinase-like Gene Family AT3G53810 33.043 1.73e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju05g0311 Pkinase 3.2e-20 CL0016