Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0310 ATGGAAGGACTCCATGAGTTCTTGTGCTCTTACCTACCAGAGAATTGGCCAAACAGGGCACTGGGATTGACCTCTTGTTGTTTATTTGGTGGAGCTCCATATCAAGCACAAGAATTTAAACTCAAGAAGGGTGTTGATGTTGTTGTTGGAACTCCAAGACGCATAAAAGATCATATAGAGAGGAACAATCTTGACCTGAGCCAACTAAATTTCCGTGTCCTGGATGAAGCAGATGAGATGCTGAGGATGGGTTTTGTCGAAGATAGATGTTGA 273 0.4286 MEGLHEFLCSYLPENWPNRALGLTSCCLFGGAPYQAQEFKLKKGVDVVVGTPRRIKDHIERNNLDLSQLNFRVLDEADEMLRMGFVEDRC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0310 90 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 90 IPR014001 -
Alju05g0310 90 Pfam DEAD/DEAH box helicase 21 87 IPR011545 GO:0003676|GO:0005524
Alju05g0310 90 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 88 IPR027417 -
Alju05g0310 90 Gene3D - 5 89 IPR027417 -
Alju05g0310 90 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 22 88 - -
Alju05g0310 90 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 73 81 IPR000629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0310 Alju-ChrAlju05 4705904 4706412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0310 21 85 Eukaryotic Initiation Factors Gene Family AT1G72730 43.077 4.10e-10 52.8