Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0299 ATGGAGCAAGATCAATTCTGGATGTGGACGACGAAGAGGAAGTACTCTTTGAGTTCTTGTAATAATCTCATAACTTCATCATCAACAACAAAACCCTCTTCTTGTTCTTATGATGATTCTTCATGGGAAGAACAAGCTTTCGCCGAAGACGCTTCGGGGCCTCTTGGTGGATGCATATGGCCGCCGAGATCATACACTTGCAGCTTCTGTAGAAGAGAGTTCAGATCAGCTCAAGCTCTTGGAGGCCACATGAATGTTCATAGAAGAGATAGAGCCAGACTCAAACAGCCTTCAAGCCCGCAAAACAACAATGAACTTCATCATCAAATTCCAAATACTTCTTCTTCTTCCTTTATGGGTTTCCTATACCCCTACAATAATAATAATTGTTCTCCTACTAACCCTAATTCTGTTCTTGTTGCTTCACCTTCTTCTAATATGGCTTTAGCTCCATCTTCAAACATTGCTTCTAATTCTTCTTCTATTGTTCCCCCACCACAAGGACATAGGGTTATGGCTTCTAATTATTCTTCTCCCTATTCTTCTTCGAACTGGTCAAACTTGGCTGAAGCTGAAGAAGCTGAGAAGATCACAGAGGTATTGGATTGTGAGTGCGATCATGAGGATAATGGAAAATCTGATTTGGCTTTTAGTTTAAATTTGGTGGTGTGTGGAGGTATTGAGACAAAGGAGGAAGATATAATTAGTTGCAAGAAGAGAAGAACTTGTGAAACTTCATCGATTCTTCCTCTCTTCCCAAATTCAAATTCTTCAACTCAATTGATTAGCCCTAGCCCCAAAGAAGAGCTAGATCTGGAGCTAAGGCTGGGTCAAAGCAAGCACAAGGTATAG 852 0.4085 MEQDQFWMWTTKRKYSLSSCNNLITSSSTTKPSSCSYDDSSWEEQAFAEDASGPLGGCIWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPQNNNELHHQIPNTSSSSFMGFLYPYNNNNCSPTNPNSVLVASPSSNMALAPSSNIASNSSSIVPPPQGHRVMASNYSSPYSSSNWSNLAEAEEAEKITEVLDCECDHEDNGKSDLAFSLNLVVCGGIETKEEDIISCKKRRTCETSSILPLFPNSNSSTQLISPSPKEELDLELRLGQSKHKV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0299 283 Pfam C2H2-type zinc finger 65 89 - -
Alju05g0299 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Alju05g0299 283 Gene3D Classic Zinc Finger 62 118 - -
Alju05g0299 283 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Alju05g0299 283 SMART c2h2final6 65 87 IPR013087 -
Alju05g0299 283 SUPERFAMILY beta-beta-alpha zinc fingers 62 91 IPR036236 -
Alju05g0299 283 MobiDBLite consensus disorder prediction 88 109 - -
Alju05g0299 283 PANTHER OS07G0101800 PROTEIN 36 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0299 Alju-ChrAlju05 4491657 4492508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0299 38 163 C2H2 Transcription Factor Family AT4G17810 45.588 4.69e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju05g0299 zf-C2H2_6 5.1e-06 CL0361