Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0295 ATGAAGATACCTACCAATCTCTGTCTTCTTCTTCTTCTTCTTCTCTCTTTCTCCACATTAGTCATATCCTTTAGCCATTGTCCAGATTGTGGCCACACCCAAGTCCCATTCCCACTTAGCACAAACCCTCATTGTGGCGACCCTTCTTATAAGGTTCGATGCCATAATGGTGCCCTCTGGTTCGACACCGTCAAGGGCTCCTCCTACATGATCACCACCATCAACCCCCAAACGCAGCGTTTTTTCATCCGGCCGCCGGGTCCAGCTGCTCACGGAACCTGTGTCTCCTCCGATTTCCAAAACCAAGGCATGTGGCTTGATGCCAACGCACCCTTCAACATCACCGCCAGTAACACCGTCGTGTACATGAACTGCTCCGAGGAGGTATTCACTCTTTTGTGGAATTGCTCGTCGTCAAGCGTTTGTCATAGTTATGTTAAGGCCCGAGCCGCCAGGGCATGCGGCGGAAGCCCCATATGCTGCACCGTCAAGACCGGGGGGTTGGTGACGGCGTATAGGATTAGGGTGAGGAAAGAGCGGTGCGCGGCGTACGTGAGTTTTCTGAATTTGGATGAGTCGGTTCCGGTGAGTGAGTGGCCGGAGCCCGGGGTGGAGATAGAGTGGGAGTTGCCGCAGGACCCTGTGTGCAAGGTGCCGGCAGATTGTGTTGGTTTGGCAAACTCGGCATGCTCGCCGTCGCCGGTTCCGGCTATGGGTGGAGTGAGGAAGTGCTTGTGCAACTCTGGTTTTCAGTGGGATCCTGTAAACGGAACATGTCAGAATATCAAGTGTGAGCAGGGAATAGGATGCAAGCTTCGTAGTAAGAAGAAAGTTCAACTTATTGGAGGCTTGGCATTTGCTGTGGCTGCAATGATGGCCGGAATCCTAATCACGGCAATGGGTTTTCGCTACCGGAGGCAGAAAGCAGCCAAACTTTTAAGCATGAGCAGAGCACATGATATATTGAATGCCGACAACAACAGCGGAAGATCAGCCAAGATTTTCACCATCAAAGAAATCACAAAAGCCACAAACAACTTCTCCAAACAAAACCTCCTCGGCTCCGGCGGCTTCGGCGAGGTTTTCATGGGAACCCTCGCCGACGGCACCCTCACCGCCATCAAGCGCGCCATGCTCGGCAACACCAGAGCCGTCGAACAGATCCTCAACGAGGTTAGAATCCTCTGCCAGCTCAACCACCGTAGCCTCGTACGCCTCCTGGGTTGCTGCATTGAACTCCACAACGAACCCCTCCTCATCTACGAGTACGTCCCCAATGGAACCCTCTTCGACCACCTCCACAACACGGCCAAGTGGGCCCCAATCCGGTGGCGTCGACGGCTAAAAATCGTCCACCAAACAGCAGAAGGTCTCTCCTACCTTCACAACTCAGCCATACCTAGAATCTTCCACAGAGACGTAAAATCCAGCAACATTCTCTTAGACAGCAACCTTAACGCTAAAGTCTCCGACTTTGGACTTTCCAAACTAGCTCAGAGCGAAGCGAGCCATATCACAACATGTGCACAAGGCACATTGGGATATCTTGATCCAGAATATTACATGAACTTTCAGGTGACGGATAAGAGTGACGTGTACAGTTTTGGGGTGGTTATGTTGGAGATATTGACGGCGAAGAAGGCTTTGGATTTTGGGAGGGAAGAGGAAGATGTGAACTTGGTGGTGTATGTGAAGAGGGCGATGAAGACGATGAGGTTGATGGAAGTGACTGATCCAACGGTGAGGCATGGAGCGAGTAAGATGGAGTTGGAGAGTATGAAGGCTTTAGGGGATCTTGCAATTGCTTGTTTAGATGAACATAGGCAAAATCGACCGTCCATGAAAGATGTTTCTGATGAGATTCAACATATTCTTCACTCTCTTTCTTATTCTGATGATTCTGATTCTTATGGCCTGTTGAAGGGTGAAGCTTCCGACGAGTTTATTCTACAGTAA 1956 0.5061 MKIPTNLCLLLLLLLSFSTLVISFSHCPDCGHTQVPFPLSTNPHCGDPSYKVRCHNGALWFDTVKGSSYMITTINPQTQRFFIRPPGPAAHGTCVSSDFQNQGMWLDANAPFNITASNTVVYMNCSEEVFTLLWNCSSSSVCHSYVKARAARACGGSPICCTVKTGGLVTAYRIRVRKERCAAYVSFLNLDESVPVSEWPEPGVEIEWELPQDPVCKVPADCVGLANSACSPSPVPAMGGVRKCLCNSGFQWDPVNGTCQNIKCEQGIGCKLRSKKKVQLIGGLAFAVAAMMAGILITAMGFRYRRQKAAKLLSMSRAHDILNADNNSGRSAKIFTIKEITKATNNFSKQNLLGSGGFGEVFMGTLADGTLTAIKRAMLGNTRAVEQILNEVRILCQLNHRSLVRLLGCCIELHNEPLLIYEYVPNGTLFDHLHNTAKWAPIRWRRRLKIVHQTAEGLSYLHNSAIPRIFHRDVKSSNILLDSNLNAKVSDFGLSKLAQSEASHITTCAQGTLGYLDPEYYMNFQVTDKSDVYSFGVVMLEILTAKKALDFGREEEDVNLVVYVKRAMKTMRLMEVTDPTVRHGASKMELESMKALGDLAIACLDEHRQNRPSMKDVSDEIQHILHSLSYSDDSDSYGLLKGEASDEFILQ 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0295 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Alju05g0295 651 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Alju05g0295 651 SMART serkin_6 347 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0295 651 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0295 651 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 320 423 - -
Alju05g0295 651 Pfam Protein tyrosine and serine/threonine kinase 350 620 IPR001245 GO:0004672|GO:0006468
Alju05g0295 651 CDD STKc_IRAK 353 624 - -
Alju05g0295 651 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Alju05g0295 651 SUPERFAMILY Protein kinase-like (PK-like) 330 626 IPR011009 -
Alju05g0295 651 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 641 IPR044652 GO:0004672
Alju05g0295 651 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Alju05g0295 651 FunFam Wall-associated receptor kinase-like 20 424 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0295 Alju-ChrAlju05 4409700 4413080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0295 27 629 Receptor kinase-like Gene Family AT5G02070 52.512 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju05g0295 PK_Tyr_Ser-Thr 1.2e-45 CL0016