Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0260 ATGTCGAGCATACAAATGTCCCATGTAGATTTAGAGCAAGGAGGAGGTTACCATCGTTCGTTGGTCGCGAGTGATGTCAGCGCCGACGGTAGTGTATGCTTCTCCGACGCCGACGAGGGGTCCTGCTACTCTCATTTCTATTCAACCTATGGTGGTTCATACGACGATTGTAGTTTCGCCTGCGTTTCTGATTCTGAGGTTAGGTGTGTTGCTGATTCTAGGAGAGCTTCTTCAGTGACTGATTGTTCGGTGGAAGTTGAAATTCAAACTGGGGTTCCTGAAATTAAGGTGCATTTGGCCAAAGTAGAGAGAGATTGTAGAATTTGTCACTTGGGTTTGGAGAGTGATAGCAATGATGAGTCTGGGGTTCCCATTGAATTGGGATGCTCTTGTAAGGATGATCTAGCTGCTGCTCACAAACACTGTGCTGAGGCCTGGTTCAAGATCAAAGGGAATAGGACCTGTGAAATTTGCCATTCGGTCGCCCGGAATGTTCATGGAGGGAACGAGGAGGGAACAGAACATTCAAGCAATAGCAATAATGCTCCTACGGCAGCTGCAACAACAATGTCCACACCAGCACCTTCTGCAGAAACTCGAAGATTCTGGCATGGCCATAGGTTCCTGAATTTTCTGCTTGCTTGTATGGTTTTTGCTTTTGTCATATCATGGCTTTTTCACTTTAATGTACCTTCCTCTTAA 702 0.4601 MSSIQMSHVDLEQGGGYHRSLVASDVSADGSVCFSDADEGSCYSHFYSTYGGSYDDCSFACVSDSEVRCVADSRRASSVTDCSVEVEIQTGVPEIKVHLAKVERDCRICHLGLESDSNDESGVPIELGCSCKDDLAAAHKHCAEAWFKIKGNRTCEICHSVARNVHGGNEEGTEHSSNSNNAPTAAATTMSTPAPSAETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0260 233 MobiDBLite consensus disorder prediction 168 193 - -
Alju05g0260 233 PANTHER ZINC FINGER, RING-CH-TYPE 26 232 - -
Alju05g0260 233 MobiDBLite consensus disorder prediction 171 193 - -
Alju05g0260 233 SMART ringv_2 105 159 IPR011016 GO:0008270
Alju05g0260 233 SUPERFAMILY RING/U-box 103 162 - -
Alju05g0260 233 ProSiteProfiles Zinc finger RING-CH-type profile. 98 165 IPR011016 GO:0008270
Alju05g0260 233 Pfam RING-variant domain 106 158 IPR011016 GO:0008270
Alju05g0260 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 168 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0260 Alju-ChrAlju05 3950237 3953000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0260 64 233 C3H Transcription Factor Family AT5G05830 60.819 1.57e-69 210