Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0239 ATGCTTCAGATTCGGCTTAGTAAGGTTCCAGCCGCTGAAGGTTTAGCAGGGGTGAAGCCCTCATCTGTTGAGACTGTTACAGTTACTTGTCCTGATCATCTAGTCCTTGCTGATCTTCCTGTAGCAAAGGGCATAGGTTCAGCAACTGCTACTTCTCTGGTGAAGTCTCTTGGGCGTAGATCTCGCCGCCAATGTGGTGACTGTGTCCACTTCTGTGTTCGTTGTGACTTCCCAATTGCAATCTATGGACGGCTGAGCCCTTGCGACCATGCCTTCTGTCTTGATTGTGCTAGAAGTGATTCAATATGCTACCTTTGTGATGAACGAATCCAGAAAATTCAGACAATCAAAATGTTAGAAGGAATATTCATCTGTGCAGCTCCTCACTGCTTCAAGTCTTTCTTGAAGAAGTCAGAATTTGAAATGCATATCCAAGATGTGCATGCTGACCTTCTCCGTCCCAATGTAGATAAAGAAGATGGAAATGAGTCAGAGACTCCCAGTGTTCGACAATCTGCAATGTCAGATTCCTCTGCTCGAGCTCCCCAAAGGCCTGTTTTCTCTCCTGGTTCAAATTCCCAGCTACATGATCGAGAAGACAAGGCTCGTCAGCAACCGCCAAGAGACCAGCCACCTTCAGGGCCGACTTTGCAGTCAAAGCCGCCTTCTTTTGGTCACGTTCAAAATCACTCTGCAGATCCCCAGTCTGGCTCTAATGGAGCTATTCCGCAGGGCTTCTATCAACAAAGTTCCGACATGCAGCGACCTCCGCAAGATCCTTCCCAGTTTACAGATCAGCATCGAGGAGCCACACCGGAGACACCATTCCCTGATTATCCACCCATGCACTCCTCCCAGACACCCAATTTCCCAGTGCCAGTGAATGCTAACCCAATGTTGAATCCTCCTGTGCCATTTGGTTATCCTCCGTATCCACCGCACGATGGAGCTCCACCATTTTATGTGAACCCCTATGATATGCGTTGGCAGGACTCAGCTTCTGAAGGAGGTGGAGACCAGAATTCCTTACTTGGTTTTCCACCGGTTGGGTCAACTGGCCCTAATTTTCCAGGAAATTATCCTCAGCCCATGAATGCAGGTGGCCCACCTTTTGAACAAGGACACGGTGGCATGGCTATGGATCCGCGAGATGGTAAAGGGATATTGGCACCACAGTCCATGGCCCTCCCACCTCCACCGCCGTTGCCACCAATGTCTCATCTGAATAAGTATTATTCTGGTGAGTTTGGACATAATGGACATGGTTATGGTTGGCACCATGATAATCGTGAAGCATTTGGTGGTCAGGACTAG 1314 0.4878 MLQIRLSKVPAAEGLAGVKPSSVETVTVTCPDHLVLADLPVAKGIGSATATSLVKSLGRRSRRQCGDCVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTIKMLEGIFICAAPHCFKSFLKKSEFEMHIQDVHADLLRPNVDKEDGNESETPSVRQSAMSDSSARAPQRPVFSPGSNSQLHDREDKARQQPPRDQPPSGPTLQSKPPSFGHVQNHSADPQSGSNGAIPQGFYQQSSDMQRPPQDPSQFTDQHRGATPETPFPDYPPMHSSQTPNFPVPVNANPMLNPPVPFGYPPYPPHDGAPPFYVNPYDMRWQDSASEGGGDQNSLLGFPPVGSTGPNFPGNYPQPMNAGGPPFEQGHGGMAMDPRDGKGILAPQSMALPPPPPLPPMSHLNKYYSGEFGHNGHGYGWHHDNREAFGGQD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0239 437 FunFam E3 ubiquitin-protein ligase Hakai 69 123 - -
Alju05g0239 437 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Alju05g0239 437 MobiDBLite consensus disorder prediction 219 269 - -
Alju05g0239 437 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Alju05g0239 437 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 426 IPR040383 GO:0016567|GO:0061630
Alju05g0239 437 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Alju05g0239 437 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 149 IPR013087 -
Alju05g0239 437 MobiDBLite consensus disorder prediction 166 193 - -
Alju05g0239 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 123 IPR013083 -
Alju05g0239 437 MobiDBLite consensus disorder prediction 153 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0239 Alju-ChrAlju05 3641620 3644194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0239 1 434 C2H2 Transcription Factor Family AT5G01160 45.682 3.66e-108 322