Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0221 ATGCCTTCTTCTTCCACCACCATTATCTCAAAATGCACCATCTTCCCAGATCAGAAATCCCCACTCACAACTCTCAAGCTCTCTGTCTCTGACCTCCCTATGCTCTCTTGTCATTACATTCAAAAGGGTGTTCTCCTTCCCATCCCTCCTTACTCCCTCGATGATCTCATCGTCTCCCTCAAACACTCTCTTTCTCTCACTCTTTCCCATTTTCCCGCCTTCGCCGGCCGATTAATCACCGACGATCTTGGCTTTGTCCACGTCCTCTGCAATGATGCCGGCGTTGATTTTGTTCACGCCAGGGCTAAACACCTCCTTATCAACGCTATTTACAACCCCGAACTTGTGGATGTCCCCAATTGCTTTAAGGAATTCTTTGTCTATGACAACACCATCTCTTATTCCGGCCACCACAACCCGCTAGCCGCCGTCCAGGTCACCGAGCTCGCCGATGGGGTGTTCATAGGATGCACCGTGAATCACTCCCTCACCGACGGGACTTCCTTCTGGCACTTCTTCAATACCTTCGCTGAGATCTCTAAGGGCGTGAAGAAGATTTCGAAGTCGCCGGATTTCACCCGCGACACCGTTTTCAACTCTCTCGCCGTTCTGAGAGTGCCCGACGGCGGCCCAAAGCTGACCTTCGACGCAGACCAGCCTCTCCGGGAGAGAGTTTTCCACTTCAGCAGGGAAGCTATTCAGAAGCTGAAGCTCAGAGCCAACAATGGCGGCCGTAACGGTATCACGGATTCCACGGAGGTAATGGGGAAGCAGGTTAACGACAGTTGGAAAACCGTTAACGGCGTTACTAACGGGAAGATAACGGCAGTTAACAACGACGTACCAGCTAGGACCGGAGAGATCTCATCTTTCCAATCCTTATCTGCTCAGCTGTGGCGTTCCGTAACACGTGCGAGGAAGTTGGGCCCATCCAAAACGTCGACGTTTCGCATGGCGGTGAACTGTCGTCACCGTCTGAGGCCCAAGATGGACGCTTACTACTTCGGCAACGCGATACAGAGCATCCCGACCGTCGCTGAAGTCGGTGAGATTCTCTCTCGTGATCTGCGGTGGTGCGCAAATCTTCTCCATCAAAACGTCGTCGCACACGACGACGCCATGGTGCGCTGCGGCATAGAGGATTGGGAAAACGCTCCGAGGCTGTTTCCGCTGGGGAACTTCGACGGCGCGTCAATCACGATGGGCAGCTCACCGCGTTTTCCGATGTACGACAACGATTTCGGATGGGGCCGACCGCTGGCTGTTAGGAGCGGGAAGGCGAACAAATTCGACGGCAAGATCTCGGCGTTTCCGGGGAGAGAAGGAAACGGAAGTGTTGACCTGGAAGTCGTTTTGGCACCGGAGACCATGGCGGGTCTTGAAAACGACACAGAGTTTATGCAGTACGTATCGCCGATCGTGTGA 1425 0.5368 MPSSSTTIISKCTIFPDQKSPLTTLKLSVSDLPMLSCHYIQKGVLLPIPPYSLDDLIVSLKHSLSLTLSHFPAFAGRLITDDLGFVHVLCNDAGVDFVHARAKHLLINAIYNPELVDVPNCFKEFFVYDNTISYSGHHNPLAAVQVTELADGVFIGCTVNHSLTDGTSFWHFFNTFAEISKGVKKISKSPDFTRDTVFNSLAVLRVPDGGPKLTFDADQPLRERVFHFSREAIQKLKLRANNGGRNGITDSTEVMGKQVNDSWKTVNGVTNGKITAVNNDVPARTGEISSFQSLSAQLWRSVTRARKLGPSKTSTFRMAVNCRHRLRPKMDAYYFGNAIQSIPTVAEVGEILSRDLRWCANLLHQNVVAHDDAMVRCGIEDWENAPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDTEFMQYVSPIV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0221 474 Gene3D - 6 205 IPR023213 -
Alju05g0221 474 Pfam Transferase family 6 467 - -
Alju05g0221 474 Gene3D - 219 467 IPR023213 -
Alju05g0221 474 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0221 Alju-ChrAlju05 3464306 3465730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0221 8 462 Monolignol Biosynthesis Gene Families AT5G48930 25.690 3.62e-34 131