Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0218 ATGGATGCCGTGGTTAAGTCGCCGGAAAATTCATCGATTCCCGTCAAGAATGTGATAGTACACCCTCTGGCTCTTCTAAGCGCCCTCGATCACTTCTTTCGGGACGCTCCCTACACCCCGGAGCCCGAGGAACGGTTCGGGCGGGTGGTCGGAGTCTTGCTCGGCAGCTCCTTTAACGGTACTGTCGAAGTTTCCAACAGCTATGGAGTTCCTTTTAAGGAAAACGAAGACAACCCAAGCGCCTGGTTCCTTAACCGCGACTACGTCGAGAAAATGTTTTCTTTGTTCAAGAAAGTGAATGCTAAGGAGTATATTGTGGGATGGTACAGTGCAGCCCTACAACTTGGAGAGAATGATATGGACATCCACAAATTATTCCACAAATATGTTCCAAATCCGGTCTTGGTCCTTGTTGATGTGCTACCTACGGACGATAGTTTACCCATGAAAGCTTTCTGTGATATTGCTGCAAAAATAGGTCACAAGGTTTTTGTTCATGTCCCTTCCGAAATTGCTGCTGATGAGGCTGAGGAAGTTGGGGTTGAACACTTGTTAAGAGATGTGGAACGTACAACCATGGATACACTTGAAACTGAGGTTTCTGATAAACTTACAGCCTTAGCAGAATTACATACTCTCCTGAAAGACAAAATAGGTCGGTACCTCGGTATGGCTGTTAAGGAATCGTTTCCATCAAACCATGAGATACTTTGGAATCTGCAGGATATGCTAAACTATTTTCCGAATCTCAATGATTCTGAGTTAATCAAGGCCCTTGCAGTAAAAACAAACGACATGATGATGGTCTTATTTCTATGCTTTCTCATCCGCTGTGTCATTACGCTTCACAACTTGATAAACAACAAGATAATGAACAAGGAACTCGAGATAGCTAAAGATGCAGGGATAGTTGCATTTGATTATAGAGTTCCTTGA 936 0.438 MDAVVKSPENSSIPVKNVIVHPLALLSALDHFFRDAPYTPEPEERFGRVVGVLLGSSFNGTVEVSNSYGVPFKENEDNPSAWFLNRDYVEKMFSLFKKVNAKEYIVGWYSAALQLGENDMDIHKLFHKYVPNPVLVLVDVLPTDDSLPMKAFCDIAAKIGHKVFVHVPSEIAADEAEEVGVEHLLRDVERTTMDTLETEVSDKLTALAELHTLLKDKIGRYLGMAVKESFPSNHEILWNLQDMLNYFPNLNDSELIKALAVKTNDMMMVLFLCFLIRCVITLHNLINNKIMNKELEIAKDAGIVAFDYRVP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0218 311 ProSiteProfiles MPN domain profile. 18 158 IPR037518 -
Alju05g0218 311 Pfam Maintenance of mitochondrial structure and function 175 287 IPR024969 -
Alju05g0218 311 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 13 290 - -
Alju05g0218 311 Gene3D Cytidine Deaminase, domain 2 10 195 - -
Alju05g0218 311 SMART pad1_6 17 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0218 311 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 131 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0218 Alju-ChrAlju05 3436950 3439615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0218 7 250 Eukaryotic Initiation Factors Gene Family AT2G39990 29.762 2.44e-24 98.6