Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0217 ATGGACGACGTGGCGAAGTCGCCGGAAAAATCATCGAGGCCCATCAAGAAGGTGACTGTACACCCTCTGGTTCTTCTAAGCATCATCGATCACGAAAAACGGCTCTCCACGGCCGGGCGGGCCGTTGGAGTCTTGCTTGGCAGCTCCTTCAAAGGCATTGTCGATATTTCCAACAGCTATGCAGTTCCCTTTGAGGAAAAGTTGGACGACCCAAGTGTCTGGTTCCTTGACGATGACTACGTCGAGAAAATGTTTGCTCTGTTCAAGAAACTAAGTGCTAAGGAGCATATTGTGGGATGGTACAGTACACGCTACAGACTTCTAGAGAATGATCTGGACATTCACGAATTATTTTACAAATATATTCCAAATCCGGTCTTGGTCGTTACTGATACTGATGTGCGATCTAAAGTGCCTGGTATACCCACAGAAGCTTATTATTGTGATATTGAAGAAGGGAAGGAGCATGCTGTTACAAAAAGAAGTAAGAAGGTTTTTGTTCACGTCCCTTCTGAATATGCTGCTGATGAGGCTGAGGAAATTGGAGTTGGATGCTTGTTAAGAGATATGAAGGATACAACCAGCAATACACTTGCGACTGAGGTTTCTGATAAACTTACAGCCTTGAAGTGTTTACATGCTAGATTAAGCTTGAGATGTTTTGTCCTTGGTCTTTTTATCAAAGGATTTACATCAATAAGCCATGAGAAACTTTACCAAGTGCAGGATATGCTCAACCATCTTCCGAATCTCAATGATTCTGAGTTAATCAAGGCCCTTACAGTAAAAACAAACGACATGATGATGATGCTATTTCTAGGTTCTCTCATCCGTTGTGTCATTGCGCTTGACAACTTGATAGGCAACAAGATTATGAACAAGGAACTCTAG 891 0.4265 MDDVAKSPEKSSRPIKKVTVHPLVLLSIIDHEKRLSTAGRAVGVLLGSSFKGIVDISNSYAVPFEEKLDDPSVWFLDDDYVEKMFALFKKLSAKEHIVGWYSTRYRLLENDLDIHELFYKYIPNPVLVVTDTDVRSKVPGIPTEAYYCDIEEGKEHAVTKRSKKVFVHVPSEYAADEAEEIGVGCLLRDMKDTTSNTLATEVSDKLTALKCLHARLSLRCFVLGLFIKGFTSISHEKLYQVQDMLNHLPNLNDSELIKALTVKTNDMMMMLFLGSLIRCVIALDNLIGNKIMNKEL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0217 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 11 290 - -
Alju05g0217 296 Pfam Maintenance of mitochondrial structure and function 177 287 IPR024969 -
Alju05g0217 296 Gene3D Cytidine Deaminase, domain 2 10 197 - -
Alju05g0217 296 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0217 296 SMART pad1_6 17 151 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0217 296 ProSiteProfiles MPN domain profile. 18 153 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0217 Alju-ChrAlju05 3432453 3435549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0217 6 132 Eukaryotic Initiation Factors Gene Family AT2G39990 37.984 5.37e-19 83.2