Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0216 ATGGACGCCGAGGTTAAGTCGCCGGAAAACTCATCGATTCCCGTCAAGAATGTGATAGTACACCCTCTGGTTCTTCTAAGCGTCGTCGATCACTACCTTCGGAACTACGGGGACTCCGAGTCCAAGGAACCGATCGGGCGGGCCGTCGGAGTCTTGCTCGGCAGCTCCTTCGAAGGCACTGCCAAAGTTTCCAACAGCTATGGAGTTCCTTTTGAGGAAGACAGAAAGGACCCTAGTGTCTGGTTCCTTGACCACGACTACGTCGAGAAAATGTTTTCTTTGTTCAAGGAAGTAAACGCTACGGAGCATATTGTGGGATGGTACAGTACAGGCCCAAAACTTCGAGAGAATGATATGGATATCCACAGATTATTTCGCAAATATGTTCCAAATCCGGTCTTGGTCATTGTTGATGTGCGACCTACGGAGCATAGTTTACCCACAAAAGCTTTCTGTGATGTTGAAGAATCGAAGAAGACTGCTACACAAATAGGTCACAATGTTTTTGTTCATGTCCCTTCTGAAATTACTGCTGATGAGGCTGAGGAAGTTGGTGAGATGAGCAAAAATGTTGCAGTTAGAATTGAACACTTGTTAAGAGGAGTGAAACATCCAACCATCAGTACACTTGGAACTGAGGTTTCTGATAAACTTACAGCCTTAAAGGAATTACATACTCTCTTAAAATACAAAATATGTTGGTACCTCGGAATGGCTGTTTCGGGATTGTTTCCATCAAACCGTGAGATACTTTGGAGTCTGCAGGATATGCTAAACTATTTTCCGAATCTCAATGACTCTGAGTTAATCAAGGCCCTTGCAGTAAAAACAAACGACATGATGATGGTCCTATTTCTTTGCTTTATCCTCCGCTGTACCATTGCGCTTCACAACTTGATAAACAATAAGATAATGAACAAGGAACTCGAGAAAGCTATAGATGCAGGGATAGTTGCATTTGATTATGGAGTTCCTTGA 978 0.4335 MDAEVKSPENSSIPVKNVIVHPLVLLSVVDHYLRNYGDSESKEPIGRAVGVLLGSSFEGTAKVSNSYGVPFEEDRKDPSVWFLDHDYVEKMFSLFKEVNATEHIVGWYSTGPKLRENDMDIHRLFRKYVPNPVLVIVDVRPTEHSLPTKAFCDVEESKKTATQIGHNVFVHVPSEITADEAEEVGEMSKNVAVRIEHLLRGVKHPTISTLGTEVSDKLTALKELHTLLKYKICWYLGMAVSGLFPSNREILWSLQDMLNYFPNLNDSELIKALAVKTNDMMMVLFLCFILRCTIALHNLINNKIMNKELEKAIDAGIVAFDYGVP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0216 325 ProSiteProfiles MPN domain profile. 18 157 IPR037518 -
Alju05g0216 325 CDD MPN_RPN7_8 16 311 IPR033858 GO:0005838
Alju05g0216 325 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 13 304 - -
Alju05g0216 325 SMART pad1_6 17 156 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0216 325 Gene3D Cytidine Deaminase, domain 2 10 207 - -
Alju05g0216 325 Pfam Maintenance of mitochondrial structure and function 194 301 IPR024969 -
Alju05g0216 325 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 130 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0216 Alju-ChrAlju05 3426756 3429237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0216 7 185 Eukaryotic Initiation Factors Gene Family AT2G39990 33.333 6.39e-21 89.4