Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0214 ATGGAGGTTAAGTCGCCGGAAAGTTCATCGAGGCCCATTGAGAAGGTGATTCTACACCCTCGGATTCTTGCACACATTGTAAATCATCACAATAAGCTCTCCGAGAATAAGCTCCGGGCCGTCGGAGTCTTGCTTGGCAGCTCCTTCGAAGGCATTGTTGATGTTTCTAACAGCTATGCAGTTCCTTTTGAGGAAGACGACACGGACCCAAGTGACTGGTTCCTTAACGGCGACTACGTCAAGGAAACGTTTAAATTGTTCAATCAAATACATGCTGAGGAGGAAATTGTGGGCTGGTACAGTACTGCCCCAAAACTTCAAGAGAATGATCTGGACATTCACAGATTCTTCCACGACTGTGCTCCAAATCCGGTCTTGGTCCTTACTGATGTGCGATCTACAAAGCGTCCTATACCAATAGAAGCTTACTGTGATGTTGAAGAAGTAAAGAAGAATAAGAAGAAAAAGAAGGCTACCCAACAACGTAGGAAGGTTTTTGTTAAGGTTGCTTCGGATATTACTCTTGGAGTGGCCGATGAAATGGGTAAGACGAGCAAAAATCTTGTCGATCTTTACATTGTTGTTCAGGTTTCTCTCGAGGGGTTATTACTTGAGACTATGAGAAAACTGGATCGGCACCTTGATTTGCTTCAAACGAATCAAGTAAAAATAGGTAAGTTGCCGGAAAATTCACCGATGCCCATCGAGAAGGTGATTGTACGCCCTCTGGTTCTTCAAAGCATCATCAATCACTGCATTCGGCTCTCTAAGAAAACCCACAGGCGGGTCATCGGAGTCTTGCTCGGCAGCTCCTTCGAAGGCACTGTCAATGTTTCCAACAGCTATGCAGTTCCTTTCAAGGAAGACACGAATAACCCAAGTGTCTGGTCCCCTGACTACAAGCACGTCAAGGAGATGTTTTCTATGTTGAAGAGAATAAATGCTGAAGAACAAATTGTGGGATGGTACCGTACAGGCCCCAAACTTCTTGATAAGAATGATCTGGACATTCACGGATTTTTCCACGAATATGTTCCAAATCCGGTCCTGGTCCTTTACGATGTGCGATCTACAGTGCCTGGGATACCCACAGAAGCTTACTGTTATGTTGAGGTGTGGCCAATCAATATGATGCTTCTGAAATGCATTGAGCACTCATTAAGAGCTCTGAAACGTACAACCATTAACATACCTGCAGATGAGGATTCTTATAAACTTGCACTCGCTAGTTTAATTGGGAAAGTAAGAAAAACAATTGAGTCCCTTGACGCAGTTGCGAGCCAAGAGCATCCAGTAAACTCGGACATCGTTTGCAATCTACAGACGCGGGAGAAGGAACCAGAGACACTTGAAGATAAAGAGGAAGTTGCATAG 1374 0.4447 MEVKSPESSSRPIEKVILHPRILAHIVNHHNKLSENKLRAVGVLLGSSFEGIVDVSNSYAVPFEEDDTDPSDWFLNGDYVKETFKLFNQIHAEEEIVGWYSTAPKLQENDLDIHRFFHDCAPNPVLVLTDVRSTKRPIPIEAYCDVEEVKKNKKKKKATQQRRKVFVKVASDITLGVADEMGKTSKNLVDLYIVVQVSLEGLLLETMRKLDRHLDLLQTNQVKIGKLPENSPMPIEKVIVRPLVLQSIINHCIRLSKKTHRRVIGVLLGSSFEGTVNVSNSYAVPFKEDTNNPSVWSPDYKHVKEMFSMLKRINAEEQIVGWYRTGPKLLDKNDLDIHGFFHEYVPNPVLVLYDVRSTVPGIPTEAYCYVEVWPINMMLLKCIEHSLRALKRTTINIPADEDSYKLALASLIGKVRKTIESLDAVASQEHPVNSDIVCNLQTREKEPETLEDKEEVA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0214 457 SMART pad1_6 15 148 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0214 457 SMART pad1_6 237 372 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0214 457 Gene3D Cytidine Deaminase, domain 2 231 446 - -
Alju05g0214 457 Gene3D Cytidine Deaminase, domain 2 8 187 - -
Alju05g0214 457 ProSiteProfiles MPN domain profile. 238 373 IPR037518 -
Alju05g0214 457 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 7 189 - -
Alju05g0214 457 ProSiteProfiles MPN domain profile. 16 149 IPR037518 -
Alju05g0214 457 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 236 346 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju05g0214 457 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 14 122 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0214 Alju-ChrAlju05 3389789 3393588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0214 240 434 Eukaryotic Initiation Factors Gene Family AT2G39990 30.047 7.99e-17 79.0