Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0183 ATGATTGGAAATTGCTTCGGTGCCTTGAATTGGTGTAAACCTAGATGGAGGAATTACTCTGATGATCAGTCACGCGAACATGTGATATCAACCAAAAAGTTTAGTTATAATTCTTTGAGATCAGCAACAGGAGACTTTCATCCATCCAACAGAATTGGTCAAGGTGGTTATGGTGTTGTCTACAAGGGAGTTTTACGGGATGGAACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAGCAAGAGAATTTATGACAGAAATTGATATGATATCAAATATAAGACATCCAAACCTTGTGCAACTAGTTGGCTGCTGTATAGAGGATAACCATCGCGTATTGGTCTATGAATTTCTGGAAAACGGTAGCCTTGCAAGCCCTTTGCTTGGTTCCAAGAGTAAATGTGTTGCTCTAGATTGGCCAAAAAGGGCTTCCATTTGCTGTGGTACTGCTTCTGCTCTTGCGTTTCTTCATGACGAGGTTCAGCCAAATATTGTTCATAGAGATATAAAGGCTAGCAACATACTACTTGATGAAAACTTCAATCCCAAAATAGGGGACTTTGGCTTTGCGAAACTTTTCCCCGACAATGTCACCCATCTGAGTACACGAGTGGCTGGAACTGTGGGATATCTTGCACCAGAATATGCACTTCTAGGTCAGCTTACAAAAAAGGCAGATGTGTACAGTTTCGGTGTTCTCTTGCTTGAAGTAATCAGTGGTAGAAGTAGCAGCAAAGCTGCGTTTGGAGATAAGCTACTGGTTCTTGTGGAATGGATATGGAAGCTGAAAGAAGAAAATAGGCTTCTGGACATTGTTGATCCAGAACTAACTTCATATGATGAGACTCAGGTCATGCGTTTCATTAAGGTTGCTCTGTTCTGTACCCAAGCTGCTGCTCATCATAGACCGACCATGAAGCAAGTTGTGGAAATGCTGTCCAAGGAAGTTCACCTCAATGACAAGGCTTTGACGGAGCCCGGATTTCATAGGTGGCATCGTGCCTCCAGAAATGCCGTAAATTTTTCGCGTGAGACATCAACTTCTCAGGCAAACAAGTCTAAGAAAAGACCTGAAAATTCACACGTAACCTCTAGCCAGTTAGGTGATCCTGATACTGTGACAGACATGCTTCCAAGATGA 1152 0.4236 MIGNCFGALNWCKPRWRNYSDDQSREHVISTKKFSYNSLRSATGDFHPSNRIGQGGYGVVYKGVLRDGTQVAIKSLSVESKQGAREFMTEIDMISNIRHPNLVQLVGCCIEDNHRVLVYEFLENGSLASPLLGSKSKCVALDWPKRASICCGTASALAFLHDEVQPNIVHRDIKASNILLDENFNPKIGDFGFAKLFPDNVTHLSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLLLEVISGRSSSKAAFGDKLLVLVEWIWKLKEENRLLDIVDPELTSYDETQVMRFIKVALFCTQAAAHHRPTMKQVVEMLSKEVHLNDKALTEPGFHRWHRASRNAVNFSRETSTSQANKSKKRPENSHVTSSQLGDPDTVTDMLPR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0183 383 MobiDBLite consensus disorder prediction 343 383 - -
Alju05g0183 383 Pfam Protein kinase domain 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0183 383 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 356 - -
Alju05g0183 383 SUPERFAMILY Protein kinase-like (PK-like) 23 316 IPR011009 -
Alju05g0183 383 FunFam cold-responsive protein kinase 1 17 121 - -
Alju05g0183 383 SMART serkin_6 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0183 383 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Alju05g0183 383 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0183 383 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Alju05g0183 383 Gene3D Phosphorylase Kinase; domain 1 11 121 - -
Alju05g0183 383 Gene3D Transferase(Phosphotransferase) domain 1 122 330 - -
Alju05g0183 383 CDD STKc_IRAK 52 318 - -
Alju05g0183 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0183 Alju-ChrAlju05 2850340 2853620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0183 13 332 Receptor kinase-like Gene Family AT1G56120 50.000 5.37e-106 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju05g0183 Pkinase 3.2e-46 CL0016