Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0176 ATGGATACGCTTCTCCATCCAACGTCACCTTCAATTCTTCGCTTCAAGTCACGCATTACCGGCGCACGTTATCACACAGCCATGGCAGCTTCCGCTTCCGCCGCATCTTCCTTGTTCGGCACGCGCCTCCCCGACGTGCACTCCGGTTCCGGTCGTGTCGTGGCTCGGTTTGGTTTTGGTACCAAGAAAAGCCCGCCAAAGAAAGCATCGAAGCCTAGCTCCGATCGGCCACTATGGTACCCGGGAGCACAGGCGCCGGAATGGTTGGACGGAAGTCTCGTCGGCGATTACGGATTCGACCCGTTCGGTCTGGGAAAACCCGCTGAGTATTTGCAGTTCGAGCTGGACTCTTTGGACCAGAACCTTGCGAAGAATATGGCCGGTGACGTGATCGGAACTCGAACTGAGTTTTCCGATGTCAAATCGACGCCATTCCAACCTTACAGTGAGGTTTTCGGCTTGCAACGATTCCGTGAGTGCGAGCTCATCCATGGACGGTGGGCCATGCTTGCTACGCTCGGTGCCCTCGCCGTTGAATGGCTCACCGGCGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTTGTTGAGGGTTCATCCTACCTTGGGCAACCCCTTCCTTTCTCAATGACCACATTGATCTGGATTGAAGTTCTGGTGATTGGATACATTGAGTTCCAAAGGAACGGCGAGCTGGACCCCGAGAAGAGGCTGTATCCCGGCGGTAAGTTCTTTGACCCGCTGGGTTTGGCCGCCGATCCGGAGAAGAAGGCCATCCTGCAACTTGCAGAGATCAAGCATGCTCGTCTTGCCATGGTGGCTTTCCTTGGCTTTGCCGTTCAAGCTGCTGCCACTGGCAAAGGCCCTCTCAATAATTGGGCTACCCATTTGAGTGATCCTCTTCACACTACCATCATTGACACTTTCACTTCCTCATCTTGA 939 0.5474 MDTLLHPTSPSILRFKSRITGARYHTAMAASASAASSLFGTRLPDVHSGSGRVVARFGFGTKKSPPKKASKPSSDRPLWYPGAQAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNMAGDVIGTRTEFSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLAADPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFTSSS 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0176 312 Pfam Chlorophyll A-B binding protein 85 281 IPR022796 -
Alju05g0176 312 Gene3D Chlorophyll a/b binding protein domain 79 312 - -
Alju05g0176 312 FunFam Chlorophyll a-b binding protein, chloroplastic 127 310 - -
Alju05g0176 312 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 309 IPR001344 GO:0009765|GO:0016020
Alju05g0176 312 MobiDBLite consensus disorder prediction 57 77 - -
Alju05g0176 312 SUPERFAMILY Chlorophyll a-b binding protein 69 310 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju05g0176 Alju-ChrAlju05 2803722 2805331 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0176 38 311 Chloroplast and Mitochondria Gene Families AT3G08940 85.455 8.60e-176 486