Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0172 ATGCATAGAGTTAAAGAGCAGCTGCACCTGTGGAAGATAAGTCACACTTCAAAACTCACAGAAGCAGTTCAGAAGAAGAAGAAGAAGATGGGATTAGAGCAGGTGAGTCAGAACGATACAAAGGGCAAGATCATTACTTGCAGAGCGGCGGTGGCTCATGGAGCCGGAGAGGCGTTGGTGATAGAGCAAGTGAAAGTACATCCTCCACAGAAGAAGGAGGTCCGAATCAAGATCCTCTTTACTTCTATCTGCCACACTGATCTCTCTGCCTGGCTCGGCGAGAATGAAGCTCAAAGGGCTTATCCTAGGATTCTTGGCCATGAAGCCTGCGGGATAGTGGAGAGTGTAGGGGAAGGAGTAAAGGATGTGAAGGAAGGAGATTATGTGGTGCCCTTATTCAACGGTGAGTGTGGGCATTGCAAATTGTGCAAGTGTCCCCACACCAACATGTGCCAACACTTTGGAGTCAACCCCATCAAAAAGGACATGGTGGCCGACGGCGCCACCAGGTTCACCACCGTCCATGACGGCAAACCCATCTACCATTTCCTCAACACCTCCACCTTCACTGAGTACACCGTCGTCGACTCCGCTTGCGTCGTCAAACTCAGCGGCCTCGTCGATCAACATAGCCTCAAAAAGCTCACCCTACTCAGCTGTGGTGTTTCCTCAGGGGTAGGAGCAGCATGGAACACAGCCAATGTACAATCTGATTCTACGGTTGCCGTCTTCGGTTTGGGAGCCGTCGGCCTCGCTGTAGCTGAAGGTGTGAGAGCAAGAGGGGCGTCCAAAATAATAGGCATTGACATCAACCCCGACAAATTCACCAAAGCTCGGGAGATGGGAGTGACGGATTTCATAAATCCAAAGGATGAAGATAAGCCTGTCTACGAGATAATAAGAGAAATGACTGGAGGAGGAGTAGACTTTAGCTTTGAATGTGTAGGAAACTCTGATGTCCTCCGAAATGCCTTCTTGTCTGTTCACGAGGGATGGGGATTGACGGTAATATTGGGAATACATACAACACCACAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAGTTGTTGCGTCTGTCTTTGGAGGCTTCAAAGGCAGGTCCCACCTTCCTCTCTTTGCCAAACAATGCCTGCAAGGAGTGGTGAAGCTTGACGAGTTCATTACTCACGAGCTACCCTTTGAAGAGATCAATAAAGCCTTTGATCTTTTGGTCTCTGGCAAGTCACTGAGATGTCTCCTACACCTAATTTTGCATGACAATGTTGATAATGATGTGTGA 1293 0.4865 MHRVKEQLHLWKISHTSKLTEAVQKKKKKMGLEQVSQNDTKGKIITCRAAVAHGAGEALVIEQVKVHPPQKKEVRIKILFTSICHTDLSAWLGENEAQRAYPRILGHEACGIVESVGEGVKDVKEGDYVVPLFNGECGHCKLCKCPHTNMCQHFGVNPIKKDMVADGATRFTTVHDGKPIYHFLNTSTFTEYTVVDSACVVKLSGLVDQHSLKKLTLLSCGVSSGVGAAWNTANVQSDSTVAVFGLGAVGLAVAEGVRARGASKIIGIDINPDKFTKAREMGVTDFINPKDEDKPVYEIIREMTGGGVDFSFECVGNSDVLRNAFLSVHEGWGLTVILGIHTTPQMLPIHPMELFDGRRVVASVFGGFKGRSHLPLFAKQCLQGVVKLDEFITHELPFEEINKAFDLLVSGKSLRCLLHLILHDNVDNDV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0172 430 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 106 120 IPR002328 GO:0008270|GO:0016491
Alju05g0172 430 FunFam S-(hydroxymethyl)glutathione dehydrogenase 225 363 - -
Alju05g0172 430 Gene3D - 225 363 - -
Alju05g0172 430 Pfam Alcohol dehydrogenase GroES-like domain 72 201 IPR013154 -
Alju05g0172 430 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 212 384 IPR036291 -
Alju05g0172 430 Gene3D - 50 415 - -
Alju05g0172 430 FunFam Alcohol dehydrogenase 6 50 238 - -
Alju05g0172 430 SUPERFAMILY GroES-like 40 235 IPR011032 -
Alju05g0172 430 PANTHER ALCOHOL DEHYDROGENASE 42 417 - -
Alju05g0172 430 SUPERFAMILY GroES-like 369 419 IPR011032 -
Alju05g0172 430 Pfam Zinc-binding dehydrogenase 248 367 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0172 Alju-ChrAlju05 2768305 2774546 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0172 71 409 Monolignol Biosynthesis Gene Families AT2G21890 26.722 4.42e-11 62.4