Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0160 ATGCCGTCGAATCAAGAAGCATTGCTGATGGCCGAGAACGGAAACCTCAAGGAACCGACCGGAAAGGAGATCACGAGGCGGCGATCGGCTCGGAAAATGTCGTCTACCTCCTTGCGGAAGAAATCTGACATGAGGCTTATCTCCAAAGTTCGATGCGCCTTGCTCAGAAATTTGTTGGCTAATCTGCAAGAGGTCATTCTGGGAACTAAGCTTTCCGTCCTTTTCCCTGCGATTCCTCTCGCCATTGCTGCTGATTGCTATGGATTCAGACGACCATGGATTTTTGCGTTGAGCTTACTAGGACTGACACCACTTGCTGAAAGAATCAGCTTCCTGACAGAACAAATTGCTTATTACACTGGCCCCACAGTGGGAGGGCTTCTGAATGCTACATGTGGAAATGCTACAGAGCTCATAATAGCAATATTTGCTCTCAACAGCAACAAAATAGCTGTGGTCAAGTATTCTCTCTTGGGTTCCATCCTTTCAAACCTTCTCTTAGTCCTTGGAACCTCTCTTTTCTGTGGTGGCATAGCAAACATTTCAGTGCCACAAAAATATGACAGAAGACAAGCAGATGTGAACTCACTCATGCTTCTGCTGGCATTATTGTGCCACATGCTTCCAATGCTATTCAGATATGCTACTGCCTCAACTGCTCTCGCTGCAGACCCATCTCTCCAATTATCAAGAGCTTCAAGTATTGTCATGTTGATTGCATATTTTGCTTACCTTGTCTTCCAACTCTGGACACATCGCCAATTATTCGAAGCCCAGGATGAAGACGATAATGACGACAAAGTTTCAGAAGAAGCAGTGATAGGATTCTGGAGTGGGTTTTCCTGGCTGGTAGGGATGACAGTGTTCATAGCATTGTTGTCTGAGTATGTGGTGGAGACAATAGAGGATGCATCAGACTCATGGGGTCTGTCTGTCAGCTTCCTCAGCATAATTTTACTGCCAATAGTAGGAAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAATCTTGACATCTCTTTGGGGGTTGCTTTGGGTTCTGCAACTCAAATTAGCTTGTTTGTGGTTCCCCTCTGTGTGATCATTTCTTGGATAATGGGCAACAAAATGGATCTTAACTTCAACCCCATTGAAACCGGTTCACTTGCTTTGGCCATTATAGCCACTGCCTTCACTTTACAGGATGGAACATCTCATTACATGAAAGGTTTTATTCTCCTGCTCTGCTACCTTGTTATTGGGGCATGCTTTTTTGTACAGAGAACACCATTCAAAAGGTCTCATGAATCTCCTTCAAATCTCAAGACCAAGCTCATCTCGGCGACGTGGTGCCTAACTCAGCAACCACTGCAGTTTTCAAAGCTTAATTGTGGGTCTTGGTCTCTTTGGATTGCCTCCTTGAGATGA 1419 0.4482 MPSNQEALLMAENGNLKEPTGKEITRRRSARKMSSTSLRKKSDMRLISKVRCALLRNLLANLQEVILGTKLSVLFPAIPLAIAADCYGFRRPWIFALSLLGLTPLAERISFLTEQIAYYTGPTVGGLLNATCGNATELIIAIFALNSNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANISVPQKYDRRQADVNSLMLLLALLCHMLPMLFRYATASTALAADPSLQLSRASSIVMLIAYFAYLVFQLWTHRQLFEAQDEDDNDDKVSEEAVIGFWSGFSWLVGMTVFIALLSEYVVETIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNNLDISLGVALGSATQISLFVVPLCVIISWIMGNKMDLNFNPIETGSLALAIIATAFTLQDGTSHYMKGFILLLCYLVIGACFFVQRTPFKRSHESPSNLKTKLISATWCLTQQPLQFSKLNCGSWSLWIASLR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0160 472 FunFam Vacuolar cation/proton exchanger 122 266 - -
Alju05g0160 472 NCBIfam calcium/proton exchanger 76 422 IPR004798 GO:0006816|GO:0015369
Alju05g0160 472 NCBIfam calcium/proton exchanger 57 422 - -
Alju05g0160 472 FunFam Vacuolar cation/proton exchanger 267 423 - -
Alju05g0160 472 Gene3D - 122 257 IPR044880 -
Alju05g0160 472 Gene3D - 258 423 IPR044880 -
Alju05g0160 472 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 25 427 IPR004713 GO:0006812|GO:0008324|GO:0016020
Alju05g0160 472 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016020|GO:0055085
Alju05g0160 472 Pfam Sodium/calcium exchanger protein 280 417 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0160 Alju-ChrAlju05 2324746 2329129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0160 10 427 Antiporters AT2G38170 70.423 0.0 580