Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0151 ATGGCTTCCAATAATAATCGCTCTTCATCTTCTGATGCCTCTGCAAAAGAACGCCTTCGTTGGACTCAGCAACTTCATGATCTCTTCGTTGAAGCTGTCAAAAGACTTGGTGGTCCTGATCGAGCAACACCAAAGAGTATAGTGAAGGAGATGACGAGTATGGGGGTATCTGGAATCACCATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGATCAACAAGTTAATTCCCGAGTCTGCTACTAGTAAGTTCTTGAACTTGTTGTCCAAACAATTCAAGTTCAAGCTTGAGAGAAGAAGCATTTCGGACATACTGCCTAATTTCAGCACTTTAACCACGCTGCAGCTCAAGGAGGCTCTACACTTGCAAATGGAAGTACAAAAACGCTTGAGCGACCAACTAGAGGTTCAAAGGAGCTTGAAGTTAAAAATGGAAGCTCAAGGGAAGTACTTGGAGAGACTGGGCCAAACGTATCAAAACTCAACCATCTCCACAAAACCTGATGGCAATAATAAGCTTCATGTTAATAATAATACTGCACCTACGACGACTTCAATGTCTTGTCTTTCTGAGGAATCCGATGATATTCAACCTACTCATTATGGTTCCAAACACAGTAGGTACAACGTTGTCACTCACAAGAAGCAAAGAATCGTCGTCCAGGATGATGCTATTAGGGTTAATAATTTCCCGACAAGTTTGGATCAGCTTTCTTCTTCTTCTTCTTCTTCATCGTCGTCGTCATCATCACCTAATCCAGAATTCTGCAACCAAAACTGGGACCTACTTCCTTGGAATCAGCTCGCAGCTTCATTTCCATGTGAATCATCCTTGGTCCCAAGCTACTTGTTGTAA 858 0.4231 MASNNNRSSSSDASAKERLRWTQQLHDLFVEAVKRLGGPDRATPKSIVKEMTSMGVSGITIYHVKSHLQKYRINKLIPESATSKFLNLLSKQFKFKLERRSISDILPNFSTLTTLQLKEALHLQMEVQKRLSDQLEVQRSLKLKMEAQGKYLERLGQTYQNSTISTKPDGNNKLHVNNNTAPTTTSMSCLSEESDDIQPTHYGSKHSRYNVVTHKKQRIVVQDDAIRVNNFPTSLDQLSSSSSSSSSSSSSPNPEFCNQNWDLLPWNQLAASFPCESSLVPSYLL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0151 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 76 IPR017930 -
Alju05g0151 285 FunFam Two-component response regulator 12 76 - -
Alju05g0151 285 Pfam MYB-CC type transfactor, LHEQLE motif 116 155 IPR025756 -
Alju05g0151 285 Gene3D - 15 76 - -
Alju05g0151 285 MobiDBLite consensus disorder prediction 162 204 - -
Alju05g0151 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 254 IPR044848 GO:0003700
Alju05g0151 285 MobiDBLite consensus disorder prediction 233 254 - -
Alju05g0151 285 NCBIfam myb-like DNA-binding domain, SHAQKYF class 16 74 IPR006447 GO:0003677
Alju05g0151 285 Pfam Myb-like DNA-binding domain 19 72 IPR001005 -
Alju05g0151 285 SUPERFAMILY Homeodomain-like 15 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0151 Alju-ChrAlju05 2214693 2217280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0151 10 160 G2-like Transcription Factor Family AT3G04450 45.098 1.88e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju05g0151 Myb_DNA-binding 1.1e-06 CL0123