Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0147 ATGGAAGGCCATCATCTCCATCATCATCATCAGCAGCAGCAGCGTCATCCTCATCCTCTTCATCTTCATCGTCAATCACAACAACAACAACAGCATCTGCAGCAGCAACAACATAGTATTATTGGGCCGGCGGCGGGTGCTACGGTGGTTAACGTTGTGGATGTGGGCGGAGACAGGTTTCCTCAATGGAGTATTCAGGAAACGAAGGAGTTTTTGATAATCAGGGCAGAGCTAGATCAGGCTTTCATGGAGACGAAGAGGAACAAGCAGTTATGGGAAGTTATTTCAAACAGGATGAAGGAAAAAGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCAGGTACAAGGGATGTGAAACGATGGAGCCAGAGGCAATGAGGCAGCAGTTTCCATTTTACAACGAGCTCCAAATAATTTTCACAACAAGGATGCAGAGAATGCTGTGGGCAGAAGCGGCCGAAGGAGGCGGCGGATCGAAGAAGAAGGCGGTGCAGAATCTCTCATCAGAAGAGGAGGAGGAAGAAGAAGAAGATGACAATAACAACAAAGAAGACAGTGAAGGAGACCATCAAAAAGGAACTACGAGTAGTAGCAGGAAGAAGAAGAAGAAGAAAGGAAAGGGTGGTAATTATAGTAGTAGCAGTAGTAATATTAATGAGAGTTTGAAGAACATGAAGGAGATATTACAGGAGTTTATGAGGCAACAAATACAAATGGAGGCACAGTGGATGGAGGCTTATGAGGCGAGAGAGAAGGAGAGGAGAATGAAGGAGATAGAGTGGAGGCAAACAATGGAGGCATTGGAGAATGAGAAGATAATGATGGATCAGAGATGGAGAGAGAGAGAAGATCAACGAAGGCTTAGAGAAGAAGCTAGGGCTGAGAAAAGAGATGCTCTTATCACTGCTCTTCTAAACAAGTTCTCTAGAGACATGTAG 960 0.4531 MEGHHLHHHHQQQQRHPHPLHLHRQSQQQQQHLQQQQHSIIGPAAGATVVNVVDVGGDRFPQWSIQETKEFLIIRAELDQAFMETKRNKQLWEVISNRMKEKGYLRSPEQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQIIFTTRMQRMLWAEAAEGGGGSKKKAVQNLSSEEEEEEEEDDNNNKEDSEGDHQKGTTSSSRKKKKKKGKGGNYSSSSSNINESLKNMKEILQEFMRQQIQMEAQWMEAYEAREKERRMKEIEWRQTMEALENEKIMMDQRWREREDQRRLREEARAEKRDALITALLNKFSRDM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0147 319 MobiDBLite consensus disorder prediction 1 37 - -
Alju05g0147 319 MobiDBLite consensus disorder prediction 1 22 - -
Alju05g0147 319 MobiDBLite consensus disorder prediction 160 225 - -
Alju05g0147 319 CDD GT1 61 126 - -
Alju05g0147 319 Pfam Myb/SANT-like DNA-binding domain 62 144 IPR044822 -
Alju05g0147 319 Gene3D - 63 124 - -
Alju05g0147 319 MobiDBLite consensus disorder prediction 176 190 - -
Alju05g0147 319 FunFam Zinc finger and SCAN domain-containing 20 63 124 - -
Alju05g0147 319 ProSiteProfiles Myb-like domain profile. 63 119 IPR001005 -
Alju05g0147 319 MobiDBLite consensus disorder prediction 23 37 - -
Alju05g0147 319 Coils Coil 167 191 - -
Alju05g0147 319 PANTHER FI21293P1 8 316 - -
Alju05g0147 319 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0147 Alju-ChrAlju05 2149701 2151287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0147 58 318 Trihelix Transcription Factor Family AT5G01380 54.074 2.27e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju05g0147 Myb_DNA-bind_4 1.7e-18 CL0123