Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0096 ATGGACGTCGGCGAAACTTCTAAACCCAAAGATGGAAAGCTCTTATTGGTCATGTTAGTGGGAGCACCAGGGAGCGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGTTTTTCTACGCGTCCTTGGGTTCGTGTTTGCCAGGATATCATTAAAAATGGAAAAGCAGGAAATAAAGCACAGTGTCTAAGCAGTTTAGCTGAAGCATTGAAGGATGGAAAGAATGTATTTATTGACAGATGCAATCTTGATAGAGAACAGCGTTCAGGATTCGCAGAGCTTGGTGGACCCCAAATAGATTTTCATGCTGTTGTGCTTGATCTTCCTGCAAAGCTTTGTATTTCTCGATCTGTCAAACGATCTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCTGTGGTGAATAGAATGCTTCAGAAGAAAGAGCTGCCTACGTTAAGTGAAGGGTTTAACCGGATAACATTTTGCCAGACTGAGAATGATATCAAAGTGGCTATTGACACATACAGTGCACTTGGGCCTCTGGATAATCTTCCACATGGATGTTTTGGCCAAAAAAATAAAGAGACCAAAGTTCAAGTGGATATAATGAAGTTCTTCAAAAAGGCTGAGGTCCCAGTTTTTGCTGAGTCTACAGAGAATTGCGGCGGAAATTTGACTTCTCAAAATAATGAGATGATAGATCCCTGCCATAAAGATATGGAAAATTTTTCATCAAATTCAGATAAAGCCAACTTAGAGTCTGTGAATGTTGAAAATATCTCAGAAGGATCCACTGTTTCTCATGGTGATCATGCTTTCATGGGTGATGTTCACACACTGGCATTTCCATCTATTTCAACATCTGATTTCCAGTTTGACCATGAAAAGGCAGCTGAGATTATTGTGGAGAAAGTTGCAGAGTTCTCAAATAAGCTTGCAAATGTTAGATTTGTTTTAGTTGACTTGAGTCATGGTTCAAAGATTCTGTCTTTAGTTAAAGACAAAGCAGCTAAAAAAAACTTAGACCCCAGAAAGTTTTTTACCCATATTGGGAACATTACTTCCCTTAAGTCCAAAGGAGGCTTGCACTGTGCTGTGATAGCTAATGCTGCCAACTGGCGATTGAAACCAGGAGGTGGGGGGGTTAATGCTGCAATCTTCAAGGCTGCAGGTCCTGTTTTGGAGTCTGCAACCAAAGAACAAGCTCAATTGCTTTTGCCTGGGAATGCTATTGCTGTCCCTCTGCCATCATCTTCTCCTTTGTTTACTAGAGAGGGAGTAACCCATGTAATACATGTTCTTGGACCAAATATGAATCCACAAAGGCCAGATTGTCTCAATAATGATTACAATAAAGGATGCAAGATTCTCAGAGAGGCTTACACTTCACTATTTGAAGCTTTTGCATCAATCGTGAGGGCTGGGACAGAGCAAAAGGGCAAGAGAGATGCTGATCATGAATTTGAAAAGAGCAAGAAACACAAGGGAAGTCAGGATGATGTTGAACTGAGCAGTACTGGTAACAAGGTTGTAAACATAGATTCAAGTAATAAAGAAAGTGATGGCAGTTTGAATAAGACATGGGGATCATGGGCTCAAACTCTTCATCAAATAGCTATGCATCCTGAGAAGCATAAGGATGAATTGCTTGAAATATCCGAAGGTGTAGTTGTGCTGAATGATCTGTATCCTAAGGCAAAGAAGCATGTTTTGGTGTTGGCACGAACTAAAGGCCTCGATTGCCTGGCTGATGTTCAAAATGACCACCTTCACTTGCTAAAGAGGATGTATGATGTGGGTCGAAAGTGGGCCGAGAAGTTCTTACATGAGAATGCTTCATTAGTTTTTCGTCTTGGATATCACTCGGCTCCATCAATGCGACAACTTCATTTACATGTTATTAGCCAGGACTTTGACTCAAAACATTTGAAGAACAAGAAGCATTGGAACTCGTTCAACACCGATTTCTTCCGTGACTCGGTAGCTGTAATTGATGAGGTCTCTAATAATGGGAAAGCAACCTTGAGAGATGATGATAAATTGCTGTCCATGGAGTTGAGGTGCCATAGATGTAGAAGTGCACACCCTAACATTCCCAGATTAAAATCTCATATTAGCAGTTGTAAAGCTTCCTTTCCTACTTTCTTGCTTCAAAATGGGCGTTTGGTTCGTGCACAAGGTGAAGTTAACATCAAACCCAATGAGAATTCGTTCAGTTTCATGGCTTTCCTTCATAACCTGCTGCTTTTGGGTATTTCTCTGTTTCAACATTTATGTGGTATCAAGCAAATCCCGTCTTGCTGTGATTGGAGTGGTGTCACTTGCGATGAGCAGGGACATGTTACCGGTCTTGATTTGAGTAAAGAGTCAATCTCTGGTGGTTTTGATAGTTCAAGCAGCATCTTCAGTCTCCAATATCTTGAGGTGTTAAGTTTGGCTTCTAACAATTTCGATACTGGGATTCCGAGTGAGTTTTACAAATTGAAGAACTTGACTCACCTGAATCTGTCATATGCTGGCTTTATGGGGCAGATACCAGAGGGAATTTCTCAACTGACCAGGTTAGTTACTCTGGATATCTCCTCTCTTTCATATTTAACAGGGCTAGAGCTGAAACTTGAGGATCCAGATTTGAGAATGCTTGTTCAGAACTTTACCAGCATTAAGCAATTGTATCTAGATGGTGTAACTATATCAGCTCAGGGACCAGAATGGGGCAATGCTCTGTCATCCCTTCATAGTCTGCAAGAATTGCGCTTGTCAAACTGCAATCTTTCAGGTCCCATTGATTCTTCCCTCTCTAGCCTGAGGCTCCTCTCGGTAATTCATCTCGACCAGAACAATTTATTAGCCACTGTACCAGACTTCTTTGTTGATTTCTCAAATCTGACCAGATTGCATCGTAGCAACTGCGGGTTGAGTGGAAGTTTTCCACAAAATATCTTCCTGCTAGAGACATTAACCTTCATTGACATATCTTATAATAATGGTCTCAGTGGTTCTTTCCCTAATTTCCCATTGAATGGATCTCTCCAAACCCTTGTAGTGAGTCGCACAAATTTTACAGGAGGGCTACCAGATTCAATCAGTAACTTGAGGAACTTCGGCCCAATTCCATCATTTGGTACAGCAGAGAAGCTCACTTCTTTGGACCTTTCTAATAATGTTTTAAGTGGCGAGATTTCATCTTCTGGTCAATTTGAGGGACTACAAAATCTGGCCAGCATTAACTTGCGTAATAATTCCATCCATGGCAGCATTCCTTCCTCTCTTTTTAAACTTCCATCCCTGCGAAGCATTCAGCTTTCCAACAATCAGTTCAGTCAATTGGAAGAGTTCTCAATTGTGCCCTCCTCCGTATTAAGCACCCTTGATTTAAGCAGCAATAATTTATCAGGCCCTATTCCAGGATCTATCTTCCAAGTCAGAGGACTTGGTATTCTGCAACTTTCCTCAAACAAGTTCAATGGACAAATGCTGCTAGGTATGCTTGTGGAGCTCAGAAATTTGACTACATTAGATCTTTCATATAACAACTTGTCAATCAAGATGAACGAGTCAGATACGATCCTGTCTTCAGTTCCCTATATGAACACCCTAAAATTGGCAGGTTGCAAGCTGGAGGCTTTCCCTGCTTTCTTAAGACACCAGTCCAAGTTAACTGATCTGGATCTTTCTGAGAATCAAACCAGACCGTTGCAGGATTTGAGTTCTACTTTGACGCTCCTTGACCTTCATGACAACCAAATCCATGGGCAAATTCCTTTTTTACCTAGGCGGGCTGCCTATTTGGACTACTCAGCCAATAGATTCAGCTCTGTCGTCATCCCAGCTAATACAAGTGATTACCCGGCATACACAATTTTCCTATCTCTGTCAAATAATTCTTTTCATGACCACATTCCTACATTCTTCTGCAATTTTTCAAGTCTTCAAGTGCTTGATCTTTCCCTCAATAACTTTTCTGGCTCAATTCCTTCATGTTTAATGGCAATGAGTGAGACCCTTGCGGTACTAACTCTGGGAAAAAACAAAATCAGTGGGGAAATACCTGACGAGTTTCCAGCTTTGTGTGTTCTAAGGACTCTAGATCTCCATGGAAATCAGTTAGATGGACCTATGCCAAATTCTCTTGCAAATTGTGTGACACTGGAGGTGCTAGACCTTGGAAACAATCGTATTATTGATGGCTTTCCATGTTCGTTGAAGAACATATCCACACTTCGTGTCCTGGTCTTGAGACAAAATAATTTTTATGGTTCCATTGGATGCACAAACATCGATTCTGTCTGGCGTACGCTTCAAATTGCTGATTTAGCTTCCAACAATTTTACGGGTGTACTACCAGGAAAATCATTCAAAACATGGGAAGGAATGATGCCCGATGAAGCACAGACACTTCAATATGAGATCCTTAAATTTGGTAATGTTTATTATCAGGATAGAGTCCTTATTACCAGCAAGGGTATACAGAGGAAGTGGGTTAAAATTCTAACCGTCTTCACTGCCATTGACTTCTCATGCAACCATCTTGAAGGGAAAATACCAGAGGAGATGATGAATTTTAAAGCACTATATATGCTGAACTTATCCAATAATGCTCTCAGTGGCCAGATACCATCATCTATTGGGAATTTGAGAAGGCTCGAGTCCTTGGACGTGTCAAAAAATTCTTTGAGTGGAGAGATTCCAATACAAATTGCGAGTTTATCTTTCCTTTCATTCTTGAACCTCTCTTTTAACCAACTGGCGGGGATGATTCCTACAGGCACACAAATTCAAACATTTGAAGCATCCTCCTTCAATGGTAACAAAGGATTATGTGGACCTCCTTTGACACCAAATTGTACCAGCAGTGAAATACCAGGGATGTCAGGATCATCCCACTCTGAGATCTCAATTAATTGGAATTTCATAAGACCTGAAGTGGGATTTGTTTTTGGGATTGGAATTTTCCTTTTGCCTCTGCTTTTCTGGAAGACATGGAGAACATGGTACTGGCAACACGTTGATGACTTGCTCTATAGGGTCTTCCCACAGCTGCATTTTGTGTACGAACTCCGTGGTGGGAAACATTACAGAACTCATACGGTGGCAGTCTCACTAATCCTCTTCTGCTACTTCATTCAATATATCAAACTTGAAATAATGAACTGA 5142 0.4113 MDVGETSKPKDGKLLLVMLVGAPGSGKSTFCEEVMRFSTRPWVRVCQDIIKNGKAGNKAQCLSSLAEALKDGKNVFIDRCNLDREQRSGFAELGGPQIDFHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQKKELPTLSEGFNRITFCQTENDIKVAIDTYSALGPLDNLPHGCFGQKNKETKVQVDIMKFFKKAEVPVFAESTENCGGNLTSQNNEMIDPCHKDMENFSSNSDKANLESVNVENISEGSTVSHGDHAFMGDVHTLAFPSISTSDFQFDHEKAAEIIVEKVAEFSNKLANVRFVLVDLSHGSKILSLVKDKAAKKNLDPRKFFTHIGNITSLKSKGGLHCAVIANAANWRLKPGGGGVNAAIFKAAGPVLESATKEQAQLLLPGNAIAVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPDCLNNDYNKGCKILREAYTSLFEAFASIVRAGTEQKGKRDADHEFEKSKKHKGSQDDVELSSTGNKVVNIDSSNKESDGSLNKTWGSWAQTLHQIAMHPEKHKDELLEISEGVVVLNDLYPKAKKHVLVLARTKGLDCLADVQNDHLHLLKRMYDVGRKWAEKFLHENASLVFRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTDFFRDSVAVIDEVSNNGKATLRDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCKASFPTFLLQNGRLVRAQGEVNIKPNENSFSFMAFLHNLLLLGISLFQHLCGIKQIPSCCDWSGVTCDEQGHVTGLDLSKESISGGFDSSSSIFSLQYLEVLSLASNNFDTGIPSEFYKLKNLTHLNLSYAGFMGQIPEGISQLTRLVTLDISSLSYLTGLELKLEDPDLRMLVQNFTSIKQLYLDGVTISAQGPEWGNALSSLHSLQELRLSNCNLSGPIDSSLSSLRLLSVIHLDQNNLLATVPDFFVDFSNLTRLHRSNCGLSGSFPQNIFLLETLTFIDISYNNGLSGSFPNFPLNGSLQTLVVSRTNFTGGLPDSISNLRNFGPIPSFGTAEKLTSLDLSNNVLSGEISSSGQFEGLQNLASINLRNNSIHGSIPSSLFKLPSLRSIQLSNNQFSQLEEFSIVPSSVLSTLDLSSNNLSGPIPGSIFQVRGLGILQLSSNKFNGQMLLGMLVELRNLTTLDLSYNNLSIKMNESDTILSSVPYMNTLKLAGCKLEAFPAFLRHQSKLTDLDLSENQTRPLQDLSSTLTLLDLHDNQIHGQIPFLPRRAAYLDYSANRFSSVVIPANTSDYPAYTIFLSLSNNSFHDHIPTFFCNFSSLQVLDLSLNNFSGSIPSCLMAMSETLAVLTLGKNKISGEIPDEFPALCVLRTLDLHGNQLDGPMPNSLANCVTLEVLDLGNNRIIDGFPCSLKNISTLRVLVLRQNNFYGSIGCTNIDSVWRTLQIADLASNNFTGVLPGKSFKTWEGMMPDEAQTLQYEILKFGNVYYQDRVLITSKGIQRKWVKILTVFTAIDFSCNHLEGKIPEEMMNFKALYMLNLSNNALSGQIPSSIGNLRRLESLDVSKNSLSGEIPIQIASLSFLSFLNLSFNQLAGMIPTGTQIQTFEASSFNGNKGLCGPPLTPNCTSSEIPGMSGSSHSEISINWNFIRPEVGFVFGIGIFLLPLLFWKTWRTWYWQHVDDLLYRVFPQLHFVYELRGGKHYRTHTVAVSLILFCYFIQYIKLEIMN 1713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0096 1713 SUPERFAMILY L domain-like 964 1225 - -
Alju05g0096 1713 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 929 1612 IPR046956 -
Alju05g0096 1713 MobiDBLite consensus disorder prediction 474 519 - -
Alju05g0096 1713 FunFam Transcription factor bHLH140 321 468 - -
Alju05g0096 1713 Pfam AAA domain 16 141 - -
Alju05g0096 1713 SUPERFAMILY Macro domain-like 328 461 IPR043472 -
Alju05g0096 1713 SUPERFAMILY L domain-like 1276 1609 - -
Alju05g0096 1713 FunFam aprataxin isoform X2 524 704 - -
Alju05g0096 1713 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Alju05g0096 1713 Gene3D - 4 170 IPR027417 -
Alju05g0096 1713 Pfam Leucine rich repeat 1041 1102 IPR001611 GO:0005515
Alju05g0096 1713 MobiDBLite consensus disorder prediction 474 495 - -
Alju05g0096 1713 ProSiteProfiles Macro domain profile. 328 534 IPR002589 -
Alju05g0096 1713 SUPERFAMILY Macro domain-like 272 318 IPR043472 -
Alju05g0096 1713 Gene3D Ribonuclease Inhibitor 751 854 IPR032675 -
Alju05g0096 1713 Gene3D Leucine Aminopeptidase, subunit E, domain 1 322 467 IPR043472 -
Alju05g0096 1713 SUPERFAMILY L domain-like 757 1029 - -
Alju05g0096 1713 Gene3D Ribonuclease Inhibitor 857 1156 IPR032675 -
Alju05g0096 1713 SMART LRR_typ_2 1162 1188 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 1089 1112 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 1517 1541 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 799 822 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 907 931 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 823 847 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 1352 1375 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 1565 1598 IPR003591 -
Alju05g0096 1713 SMART LRR_typ_2 1303 1327 IPR003591 -
Alju05g0096 1713 SUPERFAMILY HIT-like 521 687 IPR036265 -
Alju05g0096 1713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 160 IPR027417 -
Alju05g0096 1713 FunFam Transcription factor bHLH140 4 172 - -
Alju05g0096 1713 Gene3D - 525 707 IPR036265 -
Alju05g0096 1713 Pfam Macro domain 363 438 IPR002589 -
Alju05g0096 1713 Gene3D Ribonuclease Inhibitor 1158 1615 IPR032675 -
Alju05g0096 1713 Pfam C2HE / C2H2 / C2HC zinc-binding finger 648 701 IPR032566 -
Alju05g0096 1713 Pfam Scavenger mRNA decapping enzyme C-term binding 531 643 - -
Alju05g0096 1713 FunFam Tyrosine-sulfated glycopeptide receptor 1 1371 1616 - -
Alju05g0096 1713 Gene3D Leucine Aminopeptidase, subunit E, domain 1 260 321 IPR043472 -
Alju05g0096 1713 PRINTS Leucine-rich repeat signature 1162 1175 - -
Alju05g0096 1713 PRINTS Leucine-rich repeat signature 1116 1129 - -
Alju05g0096 1713 MobiDBLite consensus disorder prediction 496 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0096 Alju-ChrAlju05 889490 898056 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0096 5 721 C2H2 Transcription Factor Family AT5G01310 58.104 0.0 846