Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0085 ATGGCTTCATTATCATCAAAGCTTGTTTTCTTTCTTCTCCTTCTCTTCCTTTCTCTTCTAGTTGCATCCAAAGCTCAACAAGATACCAAGTTTTCATTTGAGGGATTCAATAACAGTGAAATTTATCTAAACCTTGAAGGAGCTACAGTTGTGAAACCCAGTGGTTCACTTAAACTCACCAACAGATCATACAATATTGTCGGCCATGCTTTCTATTACAAGCCCTTTCAGATGCTTATTAACACAACCAACACAACCAAAATACTAAAAGTTTCTTCCTTTAGCACATCCTTTGTTTTCTCCATTGTCCCTTCTTCCTCTGGCCCTGGAGGCTTTGGCCTTGCTTTTGTCATAGCTCCCACAACTCAATTTCCATGGTCAAGCCCTGGCCATCTTCTTGGTCTAGTTAACGCCTCCAATGATGGAAATCCTTCAAATCACCTTTTCGTAGTCGAATTTGATACGGTAAATGGCTACAGAAGTCAGGCTGACAGTAAAGGAAACCATGTTGGGGTCAATATAAATGGCATGAACTCAAGCGTTAACGAACCGGCTGCTTATTTTAAAGAAGGCACAGAAGCTCAGAAGGAAGAATTCAGCATGGAGGAATCTGATGCTGTACAAGCTTGGATAGATTACGATGGTGAAAAGAAAATTGTGAATGTGACTATAGCTCCTATATCATTGCCTACTAAACCCTCCAAACCACTCATATCTCATCCTATTGACCTTCAAGATGTTCTGAAGGACACTATGTTTGTTGGTTTCTCAGCTTCAACTGGAGAAAGTAAAACAAGCTCTCATTACATTCTAGGATGGAGCTTCTCATTGAATGGTCCTTCTGATTCACTCAACAATTCCAAGCTTCCAGAGCCACCACCAAAGGAGAATGATCCAAGTTCAACTTCTTTCCCTTGGATCAAACTTGCAGTTGTAGTTTTATCTGCTCTGATCATAATATTGTTGTTTTCCTTGTGTTCATTAACATTGTACAGGAGGTACAACAATTTTGAGATTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCATGTGGCAACAAAAGGATTCAAAGAGAGTGAGCTAATAGGAATAGGAGGTTTTGGTGCAGTGTACAAAGGTGTCTTGCCTTCTACAGGAACTGAGGTTGCTGTGAAGAGGATTGTACGAGATCCAATCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTAAGACACAAAAACTTGGTCAATCTTCAAGGATGGTGTAAGCGAAAAAATGATCTTCTTCTGGTCTATGATTACATCTCCAATGGAAGCCTTGACTCACTCCTCTTCAATCCAAGCATTGTTCTGAGTTGGGATCAAAGGTTCAATATCATCAAAGGCATAGCTAATGGACTATTATATCTTCATGAAGAGTGGGAGCAAGTGGTGATCCACAGAGACATCAAAACAGGAAATATTCTCATAGATGAAGATTTAAACGCTCGTGTGGGCGATTTTGGCCTAGCTAGGCTGTATGATCATGGTCAAGTATCTCACACAACTAATGTTGTTGGTACAATTGGGTATATAGCACCAGAATTGACTCGTACGGGAAAGGCATCCACAAGCTCTGATGTGTATGCTTATGGGGTTTTGCTTCTTGAAGTTGTTAGTGGGAGGAGACCTGTTGATGTGTCAGGACAGTTTTTCTTGTTAGATTGGGTTGTGGAGAATCAAAGCTTGGGTCAGATTCATGAAGTTGTTGACCCAAAGTTGAATCTAAATTATGATGAAGAAGAGGTGGAATTGGTTCTGAAACTGGGTCTTCTCTGTGCTCAACACACAGCAGATTTAAGACCCAGCATGAGACAAGTTATAAGATATCTGAACTTTGATGATCCTGTTCCAGATATTGGGGATGAAAGTAGCAGAATGAGCTCAGGTTTCCTGGAAGTTGTGTCTGCAAGTACTATCTCAACTTCCTATAACTTATCTTCCATTAATAGTATGACTAGTAGGCTTGTAGAAGCTGGTAGGTAG 2040 0.4044 MASLSSKLVFFLLLLFLSLLVASKAQQDTKFSFEGFNNSEIYLNLEGATVVKPSGSLKLTNRSYNIVGHAFYYKPFQMLINTTNTTKILKVSSFSTSFVFSIVPSSSGPGGFGLAFVIAPTTQFPWSSPGHLLGLVNASNDGNPSNHLFVVEFDTVNGYRSQADSKGNHVGVNINGMNSSVNEPAAYFKEGTEAQKEEFSMEESDAVQAWIDYDGEKKIVNVTIAPISLPTKPSKPLISHPIDLQDVLKDTMFVGFSASTGESKTSSHYILGWSFSLNGPSDSLNNSKLPEPPPKENDPSSTSFPWIKLAVVVLSALIIILLFSLCSLTLYRRYNNFEILEDWELDCPHRFRYRDLHVATKGFKESELIGIGGFGAVYKGVLPSTGTEVAVKRIVRDPIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLVYDYISNGSLDSLLFNPSIVLSWDQRFNIIKGIANGLLYLHEEWEQVVIHRDIKTGNILIDEDLNARVGDFGLARLYDHGQVSHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVVSGRRPVDVSGQFFLLDWVVENQSLGQIHEVVDPKLNLNYDEEEVELVLKLGLLCAQHTADLRPSMRQVIRYLNFDDPVPDIGDESSRMSSGFLEVVSASTISTSYNLSSINSMTSRLVEAGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0085 679 Pfam Protein kinase domain 363 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0085 679 FunFam Lectin-domain containing receptor kinase VI.3 348 439 - -
Alju05g0085 679 FunFam L-type lectin-domain containing receptor kinase V.9 27 283 - -
Alju05g0085 679 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Alju05g0085 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Alju05g0085 679 CDD lectin_legume_LecRK_Arcelin_ConA 29 279 IPR001220 GO:0030246
Alju05g0085 679 Gene3D - 26 287 - -
Alju05g0085 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 294 IPR013320 -
Alju05g0085 679 CDD STKc_IRAK 369 630 - -
Alju05g0085 679 SMART serkin_6 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0085 679 SUPERFAMILY Protein kinase-like (PK-like) 347 633 IPR011009 -
Alju05g0085 679 Pfam Legume lectin domain 29 290 IPR001220 GO:0030246
Alju05g0085 679 Gene3D Transferase(Phosphotransferase) domain 1 440 634 - -
Alju05g0085 679 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Alju05g0085 679 FunFam L-type lectin-domain containing receptor kinase S.4 440 642 - -
Alju05g0085 679 PANTHER - 20 631 - -
Alju05g0085 679 ProSiteProfiles Protein kinase domain profile. 363 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0085 Alju-ChrAlju05 806113 808246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0085 30 640 Receptor kinase-like Gene Family AT3G08870 52.903 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju05g0085 Pkinase 5e-49 CL0016