Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0084 ATGGCTGTATCATCGTTAACACTTGGTTTTCTCCTCCATATAACTCTCCTTTCCCTTCTAGTTTCAGCCAGTGAGGCTCAAGAAATGCCACCGTTTTATTATGAAGGATTCGATACAAGTGACCCATTTTCCCTTGAGGTCGCTGCGCAAGTTACGAGTGATCGCATGCTTAGGCTCACCAACACATCCAACAACATTGTAGGCCGTGCATTCTATAACGGAAGAATTCCAATGTTACACAATAGCTCAGACCAACGACGTCAAAAAGCTTCTTCCTTTAGCACACATTTTGTTTTCTCCATCGTCCCCTCCTCAACCTCTGCTCCCGGCGGCTTTGGCCTTGCTTTCGTCCTAGCATCAAGCATCGACAAGTTTCGAGACGCTCAAGCTGGGCACTTCCTTGGTATTTATAGCGGTTCCGATGGTGTGAATGTGACGCACATGTTCGCAGTGGAATTTGATACGGTGGATGGCTCGGACCAAGGTGAGTCAGACACAGAAGCGAACGATGTTGGGATCAATGTTAATGGAACAGAGTCAGATATCTCTAAACGAGCTGCTTACATTGGGACAGATTCTAAATGGGTTAATTTAAGTATGGAGCAATCTGAAGCTGTGCAAGCTTGGATAGATTATGATGGCGACAACAAAATCGTGAACGTGACCATGGCTCCATTATCAGAGCCTAAACCTTCCACACCACTTATAATAAATCATTGGATTAATCTTACCACTGTTCTAACCGAATACATGTATGTCGGTTTCTCTGCGTCAACAGGGGAAGGTAAAGCAAGCTCTCATTACATTCTGGGATGGAGTTTTGCAGTCAATGAACCTGCTCGTCCTCTTGACCTTTCCAAGCTTCCAAATCCACCGCCAAGAATGAAAGATCCTTCCTCTTTTCCTTGGGTCAAGATTGCCATTGGAGTTTTGTCTGCTTTAACCATAATATTGTTGCTTTCGTTGTGTTCAGTAACATTGTACAAGAGGTACTCTTATTTTGAAGCTCTTGAGGATTGGGAGCTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCACATGGCAACCAAAGGTTTCAAGGAGAGTGAGCTAATTGGAGTTGGTGGCTTTGGTGCTGTCTACAAAGGTGTCTTGCCTTCCACTGCAACTGAGGTTGCTGTGAAGAGGATTGTACGTAGCCCAATCCAAGGAATGAGAGAATTTGCAGCAGAAATTGAAAGCTTAGGAAGATTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGTAAGCAGAAAAACGATCTTCTTCTCATCTATGACTACATCCCTAATGGAAGCCTTGACTCACTCCTCTTCAAGCAAAGCCTTGTTTTGAACTGGGAACAAAGGTTCAGTATCATCAAAGGCATAGCTAATGGACTGTTGTATCTTCATGAAGAGTGGGAGCAAGTGGTGGTCCACAGAGACATCAAAACCAGCAATATCCTCATAGATTTAGATTTAAATGCTCGTTTGGGTGATTTTGGCCTAGCTAGGCTATATGATCATGGTGAGCAATCACATACAACCAATGTGGTGGGGACAATTGGGTATATAGCACCAGAATTGACTCGCACGGGAAAGGCATCCACAAGCTCTGATGTGTATGCTTATGGTGTTTTGCTTCTTGAAGTTGTGAGTGGGAAGAGACCAATTGGGTCAGAGCAATTCTTTTTGGTGGACTGGGTTGTGGAGAATCACAATTTGGGTCAGATTCTTGAAGGGGTTGATCCTAAGTTAGGGTCTTCATATGTTGAGGAAGAGGTTGAATTGGTTCTGAAACTGGGTCTCCTGTGTGCTCAGCATAAAGCAGATTCAAGGCCCTCCATGAGACAAGTGATTAGGTACCTAAACTTTGATGACCCTCTTCCAGAAATTGGAGATTGGAGGAGACAGACAGATTCAGATAGCGGAAGAATGAGCCTGGGTTTCTTAGAAATTGCATCTACAAGTACTTCCTCAACTACACACAACTTAACCTCTAATAGTAGCGATATAAATAGTAGGCCTATCCAAACCTGTAGATAG 2052 0.4352 MAVSSLTLGFLLHITLLSLLVSASEAQEMPPFYYEGFDTSDPFSLEVAAQVTSDRMLRLTNTSNNIVGRAFYNGRIPMLHNSSDQRRQKASSFSTHFVFSIVPSSTSAPGGFGLAFVLASSIDKFRDAQAGHFLGIYSGSDGVNVTHMFAVEFDTVDGSDQGESDTEANDVGINVNGTESDISKRAAYIGTDSKWVNLSMEQSEAVQAWIDYDGDNKIVNVTMAPLSEPKPSTPLIINHWINLTTVLTEYMYVGFSASTGEGKASSHYILGWSFAVNEPARPLDLSKLPNPPPRMKDPSSFPWVKIAIGVLSALTIILLLSLCSVTLYKRYSYFEALEDWELDCPHRFRYRDLHMATKGFKESELIGVGGFGAVYKGVLPSTATEVAVKRIVRSPIQGMREFAAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLFKQSLVLNWEQRFSIIKGIANGLLYLHEEWEQVVVHRDIKTSNILIDLDLNARLGDFGLARLYDHGEQSHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVVSGKRPIGSEQFFLVDWVVENHNLGQILEGVDPKLGSSYVEEEVELVLKLGLLCAQHKADSRPSMRQVIRYLNFDDPLPEIGDWRRQTDSDSGRMSLGFLEIASTSTSSTTHNLTSNSSDINSRPIQTCR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0084 683 SUPERFAMILY Protein kinase-like (PK-like) 344 628 IPR011009 -
Alju05g0084 683 CDD lectin_legume_LecRK_Arcelin_ConA 32 277 IPR001220 GO:0030246
Alju05g0084 683 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Alju05g0084 683 Pfam Legume lectin domain 32 289 IPR001220 GO:0030246
Alju05g0084 683 MobiDBLite consensus disorder prediction 662 683 - -
Alju05g0084 683 Pfam Protein kinase domain 360 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0084 683 ProSiteProfiles Protein kinase domain profile. 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0084 683 Gene3D Transferase(Phosphotransferase) domain 1 437 629 - -
Alju05g0084 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 295 IPR013320 -
Alju05g0084 683 FunFam L-type lectin-domain containing receptor kinase S.4 437 637 - -
Alju05g0084 683 SMART serkin_6 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0084 683 Gene3D - 28 278 - -
Alju05g0084 683 PANTHER - 23 628 - -
Alju05g0084 683 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Alju05g0084 683 CDD STKc_IRAK 366 626 - -
Alju05g0084 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Alju05g0084 683 FunFam Lectin-domain containing receptor kinase VI.3 345 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0084 Alju-ChrAlju05 800813 803058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0084 32 651 Receptor kinase-like Gene Family AT5G01560 49.606 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju05g0084 Pkinase 1.4e-49 CL0016