Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0083 ATGATGCATCGTCACACTCTTCTTCAACCCTCCACCTGGTCAGTCCCCAATGACTTAACCTCTGTTTTTGATCCCTTCGATCCTTCCTCCACCTTCTTCTTTGAAGATAATCATTTCCAATTCCCAGTTGAAATGATGGGATCAGAAGCATCCAAATCCATAGAGAATTCTTCCTTCAATGAACTTGAAGTTTCTTATGTCTTCTTCTCTCAAGACAATTTCCTGTACCCAGCTAATGAAGAAGATATTCTGGGAATGGATTTGGGTGCTCTTGACCCTGATTTGAGTACCCAGTTTCTGAATATCCATGGAAGCCCAGAAGAAAGTGAAGAAAGTTTTCATCTTTCCCAGAATCTATCTTCTGAAGCAGAAGATTCTTGGGGTTCTAGTCCATCCATGAAATCATCAGAATATTCCTCTCTTCAACCAACATCACTGAACTTGCCTCAAGAAGACATGGAAATGGATATCCAAGTGATTCTTCCCCATCTCCTAGAAGCCCATGTTGAAGCAAAAGATCAGAACCAGAATGCTCTTGGAGAAGAAACCTTGAGATGCATAAACCAGAAAACAAGCCCACTTGCAGAAGATCCTCTGGAACGCCTAGCATTTCACTATTCCTCCCAAATCATCACTGGAAATCCACAGGGGCATTTTCTCAAACATGAGGCGTGCAAAAATTTTGATACTGCATTCAAGGTATTTTACCAAAGCACGTCCCATGGAAGATTTGCTCATTTTGTAGCAAATTCAGCAATTCTAGAAGCCATACCAGAGGATTCAGAAGCTGTACACATAATAGACTTTGATTTGGGAGAAGGGGTTCAGTGGGCCCCTGTGATAGAGGCCATTTCTCAACAGAACAAAGCACTGAAGTTAACATCAATCGAATGGGAAACAGAGCAAGAAAACTCTAAGGAACCCAGAAGGAACCTTATTGAATACGCAAGATCATGTGGTCTCAATATGAAGGTAGAAGAGAAGAGTTTTGAGGAATTAGTTACAGAGCTCAAGAAATTGAACAAAAGAGGAGGGAATGTGAAGAGAGATTTCCTAATCTTTAACTGCATAGTGGGTCTTGCTCACATGGGGAGAGGAAGAAGCAGAAGATCAGTCATGGAGTTTCTGAATGTAGGCAAGAACATGATCAACAAGAACACCTGCAACAACAGGGGGATCATCACTTTTGGCGATGGAGAAGCTGACGAAAAACTGAGAAATAGCATGAATTTCAGGTCATTCTTTGAAGGTAACATGATGCATTACAAGGCCTTAATGGAATCTATTGAATCAAATTTCCCAGCTTGTTTGTCACAAGCAAGAACAGCAATGGAGTTCTTATTTGTGGGACCCTATGTGTCTTCTGATGTTTGGATGAAGAAGTGGGAAGAATTGAGAGCGAATTGTCATTTTCAGGCTGGGAATGGATTTGGTATGGAAGGAAGAAGATTAAGCGGAGAGATTTTAATGGAAGCGAGGGAAATATTGAGAGGAAGCAGGGAGGGGTCGTATGAGGCAAGGATTGAAGGGCAAAATGGGAATGAAATGGTTCTCTTATGGGAAGGGACCCAGTTAGTCAAAGTGTCAACTTGGGGAAGTCAAAAGGCCTGA 1611 0.4178 MMHRHTLLQPSTWSVPNDLTSVFDPFDPSSTFFFEDNHFQFPVEMMGSEASKSIENSSFNELEVSYVFFSQDNFLYPANEEDILGMDLGALDPDLSTQFLNIHGSPEESEESFHLSQNLSSEAEDSWGSSPSMKSSEYSSLQPTSLNLPQEDMEMDIQVILPHLLEAHVEAKDQNQNALGEETLRCINQKTSPLAEDPLERLAFHYSSQIITGNPQGHFLKHEACKNFDTAFKVFYQSTSHGRFAHFVANSAILEAIPEDSEAVHIIDFDLGEGVQWAPVIEAISQQNKALKLTSIEWETEQENSKEPRRNLIEYARSCGLNMKVEEKSFEELVTELKKLNKRGGNVKRDFLIFNCIVGLAHMGRGRSRRSVMEFLNVGKNMINKNTCNNRGIITFGDGEADEKLRNSMNFRSFFEGNMMHYKALMESIESNFPACLSQARTAMEFLFVGPYVSSDVWMKKWEELRANCHFQAGNGFGMEGRRLSGEILMEAREILRGSREGSYEARIEGQNGNEMVLLWEGTQLVKVSTWGSQKA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0083 536 Pfam GRAS domain family 163 531 IPR005202 -
Alju05g0083 536 ProSiteProfiles GRAS family profile. 152 532 IPR005202 -
Alju05g0083 536 Coils Coil 323 343 - -
Alju05g0083 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 525 IPR005202 -
Alju05g0083 536 MobiDBLite consensus disorder prediction 106 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0083 Alju-ChrAlju05 782879 784489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0083 151 531 GRAS Transcription Factor Family AT5G66770 23.544 1.08e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju05g0083 GRAS 8.2e-37 CL0063