Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0060 ATGAAAAAGCACAAAGCCCCGGAGGCCAATAACCCATTTGATTCTCTCTCGGAGGAGCTCGTCTTCACCATCCTCGACCACCTTCCTCTCAATTCACTAGACAAAAAGTCGTTTTCTCTAGTTTGCAAATCTTTCTACGCAATTGAAGCCAAACATCGCCGAACCATCAGGCCTTTTCGCTCCGAACTCCTTCCTTCGATCTTGAATCGATACCCATTTGTGTCCCATGCTGATCTCTCTCTGTGCCCTCGAGTATCTGATAGTTCCCTCAACTTCTTAGCTAACGTCTGCAGTGCTACGCTCCGACGGATCGATCTCTCGCGGTCCAGGTTCTTCTCTGCTAATGGGTTGTTCAGTTTGGCTACTAATTGCAAAAATTTGGTGGAGTTAGACTTGTCCAATGCGACGGAGCTGAAAGACGCCGCGGCGTCTGCAGTGGCTCAGGCGAAGAATTTGGAGAAGCTGTGGTTGGCGAGATGTAAGCTAATAACGGACATGGGAATTGGGTGCATAGCAGTTGGGTGTAGGAAATTGAAATTGATTTGCTTAAAGTGGTGTTTGGGCGTGGGTGATTTAGGGGTAGACTTGATCGCTGTCAAGTGTAAGGAACTCCGTAGTTTGGATCTCTCTTATTTGCCTATCACAGGTAAATGTCTGTCATCAATTGTTAAATTGCATTACCTTGAAGATTTGGTCCTTGAAGGATGTTTCGGCATTGATGATGACAGCCTTGATGTCTTCAAACAAGGGTGCACAACATTAAAGAGACTTGATATCTCAGGCTGTCAAAACATAAGCCACATAGGTCTCTCTGCCCTAACAAGCTGTTCTGGATGTATTGAGCATCTTACTTTATCAGACGGTTCTCCTGTAACACCTGCTCTTGCTGATGCTCTCAATAAACTTCCCATGCTGCAATCAATCATATTAGATGGCTGCATGGTTACTTCTGCTGGATTTAGGGCCATAGGAAGTTCATGCATGTCATTAAAAGAGTTGAGTTTGAGAAAATGTTTGGGAGTGACTGATGAAGCTCTCTCATTTATTGTGTCCAAACACAAGGATTTGAGGAAGCTTGACATTACATGTTGCCGCAAGATAACTCATCTTTCAATCGCCAGCATTGTGTACTCATGCAAAAGTCTCAGTTCCCTCAGGATGGAGTCATGTACCCTAGTTCCAAGAGAAGCATTTGTGATGATTGGACAGCAATGCTATTCTCTTGAGGAGCTAGACCTCACAGATAACGAAATTGATGATGAAGGTCTTAGGTCCATTTCTCGGTGTTCCAGACTCACCAGTCTGAAATTAGGAATCTGCCTGAACATAACTGACAAGGGACTTGCCTATGTTGGCAAGTCCTGCTCAAAGTTAAAGGAGCTAGATCTCTACAGGTCCACAGGAATAACAGATCTAGGTGTTTCAGCAATTGCTTCCTGTTGCCCTGGGCTTGAGACGATTAATGTTGCTTATTGTACTGACATCACTGATGGTTCCTTAATCTCCCTGTCAAAATGCTCGGAGTTGAAAACACTGGAAATCCGTGGATGTCTTCTTGTCAAATCTAAGGGTTTAGCAGCTATTGCACCAAATTGTAAGCAACTAAGTCGTCTGGACATAAAGAAGTGTTACAAGATTGATGATAGCGGGATGATTCCACTTGCTTGTTGGTCCCAAAATCTAAAACAGATAAATCTGTCATACAGTTCAGTCACAGAAGTGGGGCTTTTGTCACTTGCTAGCATCAATTGCCTGCACACCTTGTGTCTTCTGACCTTGCAGGGAGTGACTCCAAGAGGACTTGCTGCTGCCTTGTTGGCATTTGGAGGGCTAAGAAAAGTGAAGCTCCACGTTTCCTTGAGATCAAAACTACCTGAGCCTCTTATCAAGCACATTGAGGCACGTGGCTGTGTGTTTGAGTGGAGGAATAAAGTGTTTCAGGCTGAGATGGATCCCAAGTGCTGGAAATTACAGTTGGAGGATCTGATGGAAGTCGTTTAA 2001 0.4443 MKKHKAPEANNPFDSLSEELVFTILDHLPLNSLDKKSFSLVCKSFYAIEAKHRRTIRPFRSELLPSILNRYPFVSHADLSLCPRVSDSSLNFLANVCSATLRRIDLSRSRFFSANGLFSLATNCKNLVELDLSNATELKDAAASAVAQAKNLEKLWLARCKLITDMGIGCIAVGCRKLKLICLKWCLGVGDLGVDLIAVKCKELRSLDLSYLPITGKCLSSIVKLHYLEDLVLEGCFGIDDDSLDVFKQGCTTLKRLDISGCQNISHIGLSALTSCSGCIEHLTLSDGSPVTPALADALNKLPMLQSIILDGCMVTSAGFRAIGSSCMSLKELSLRKCLGVTDEALSFIVSKHKDLRKLDITCCRKITHLSIASIVYSCKSLSSLRMESCTLVPREAFVMIGQQCYSLEELDLTDNEIDDEGLRSISRCSRLTSLKLGICLNITDKGLAYVGKSCSKLKELDLYRSTGITDLGVSAIASCCPGLETINVAYCTDITDGSLISLSKCSELKTLEIRGCLLVKSKGLAAIAPNCKQLSRLDIKKCYKIDDSGMIPLACWSQNLKQINLSYSSVTEVGLLSLASINCLHTLCLLTLQGVTPRGLAAALLAFGGLRKVKLHVSLRSKLPEPLIKHIEARGCVFEWRNKVFQAEMDPKCWKLQLEDLMEVV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0060 666 FunFam F-box/LRR-repeat protein 3 401 640 - -
Alju05g0060 666 SUPERFAMILY RNI-like 296 591 - -
Alju05g0060 666 Coils Coil 135 155 - -
Alju05g0060 666 SUPERFAMILY F-box domain 8 50 IPR036047 GO:0005515
Alju05g0060 666 Gene3D Ribonuclease Inhibitor 7 277 IPR032675 -
Alju05g0060 666 SMART LRR_CC_2 124 149 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 302 326 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 379 404 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 150 174 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 98 123 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 201 225 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 507 531 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 175 200 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 71 96 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 430 454 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 558 582 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 481 506 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 532 557 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 353 378 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 405 429 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 327 352 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 251 276 IPR006553 -
Alju05g0060 666 SMART LRR_CC_2 455 480 IPR006553 -
Alju05g0060 666 Pfam Leucine Rich repeat 454 478 IPR001611 GO:0005515
Alju05g0060 666 Pfam Leucine Rich repeat 407 427 IPR001611 GO:0005515
Alju05g0060 666 Pfam Leucine Rich repeat 326 349 IPR001611 GO:0005515
Alju05g0060 666 Pfam Leucine Rich repeat 251 273 IPR001611 GO:0005515
Alju05g0060 666 Gene3D Ribonuclease Inhibitor 396 650 IPR032675 -
Alju05g0060 666 Gene3D Ribonuclease Inhibitor 287 395 IPR032675 -
Alju05g0060 666 PANTHER UNCHARACTERIZED 284 543 - -
Alju05g0060 666 SUPERFAMILY RNI-like 56 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0060 Alju-ChrAlju05 612382 616420 Dispersed/Wgd