Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0040 ATGCTACACACATACGACGTCGCCGTTGAAGAAGACGCAGCGCCGGTCGGAGAGCCATCCTCGGGGGTCTTTCTGCTCGGAAAATACGAGTTAAAGAAGTTGTTAGGTGTGGGAGCCTCTGCCAAGGTGTACCACGCAACGAATGTAAACACGGGACAGAGCGTGGCCATCAAAGCCGTGTGCAAGAACCATGTTTTCAGAGGAGGTATCACGGCGCACGTTGAGAGGGAAATCTCTATCATGCGCCGCCTCCACCATCCCCACACCCTCAAGCTCTTCGAAGTCCTCGCCTCCAAGACTAAAATCTACTTCGTCCTCGAATTCGCCCAGGGCGGCGAGCTCTTTCACAAGGTCGCTCAGGGCCGTTTCTCTGAAGATCTCAGTCGTCGCTATTTCCATCAACTAATTTCCGCCGTCCAATACTGCCACTCCGCCGGCGTCTTCCACCGCGACCTCAAGCTCGACAACCTCTTAATCGACCAACATATGGACCTTAAGGTCTCCGACTTCGGGTTGGGTGCTCTGAAGGACCACGTCAGACCCGATGGGCTGCTGCACACCGTGTGCGGCACACCGGCTTACGTGGCGCCGGAGATGCTCGCCAAGAAAGGCTACGACGGAGCGAAGGTGGACGTGTGGTCGTGCGGAGTCATCCTGTTCGTCCTCACCGCCGGGTATTTGCCGTTCAACGACCACAATCTGGCGGCCATGTACAGAAAAATTTACAGAGGGCAGTTTCGGTTACCGAGATGGACGTCGCCTGAACTACGGCGTTTGCTGTGTCGGCTGCTGGACAAAAACCCCGAGACAAGAATCACGGTGGACGAGATAATCGGAGACCCATGGTTCAGCAAAGGGTATCGGGAGGTGCGGGTTCAACACAAGGAATTCGAATTGGAGCGGGAAAGCCGATCCAGGGGACTGAACGCCTTCGATTTGATATCGTTTTCGTCCGGTTTGGATATGTCCGGCATGTTCGGGGAATCGGGTGTTAGGGAGGGCGTGGAACGCATCGTTTCAGGGGAGAAGCCGGCGAAGATATTGGACAAGGTGGAAGGAGTGGCCAAAGTAGAGGGGATGAGGGTGAGGAAGGATGAGAATGAGGAGGGGGCGAGGCTGGAGGGGCAAAATGGTAATTTAGTGATACTTGTTACCATTTACCGGCTAACGGAGAAACTGGTTGTGGTGGAGGCGCTGAGAAGAGAGAGGAGAGTGGGAAAAGAGAAGGAGGCGAAATTCTGGGAGGAGAAATTGAAGCCCGAGCTACATAGATTGGTGTATAAAGACCAACAATAA 1296 0.544 MLHTYDVAVEEDAAPVGEPSSGVFLLGKYELKKLLGVGASAKVYHATNVNTGQSVAIKAVCKNHVFRGGITAHVEREISIMRRLHHPHTLKLFEVLASKTKIYFVLEFAQGGELFHKVAQGRFSEDLSRRYFHQLISAVQYCHSAGVFHRDLKLDNLLIDQHMDLKVSDFGLGALKDHVRPDGLLHTVCGTPAYVAPEMLAKKGYDGAKVDVWSCGVILFVLTAGYLPFNDHNLAAMYRKIYRGQFRLPRWTSPELRRLLCRLLDKNPETRITVDEIIGDPWFSKGYREVRVQHKEFELERESRSRGLNAFDLISFSSGLDMSGMFGESGVREGVERIVSGEKPAKILDKVEGVAKVEGMRVRKDENEEGARLEGQNGNLVILVTIYRLTEKLVVVEALRRERRVGKEKEAKFWEEKLKPELHRLVYKDQQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0040 431 Gene3D Kinase associated domain 1, KA1 304 428 - -
Alju05g0040 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 401 - -
Alju05g0040 431 FunFam Non-specific serine/threonine protein kinase 109 290 - -
Alju05g0040 431 CDD CIPK_C 309 422 - -
Alju05g0040 431 Gene3D Transferase(Phosphotransferase) domain 1 111 290 - -
Alju05g0040 431 FunFam Aurora kinase A 23 112 - -
Alju05g0040 431 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Alju05g0040 431 ProSitePatterns Protein kinases ATP-binding region signature. 35 62 IPR017441 GO:0005524
Alju05g0040 431 Pfam NAF domain 308 364 IPR004041 GO:0007165
Alju05g0040 431 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0040 431 SUPERFAMILY Protein kinase-like (PK-like) 26 295 IPR011009 -
Alju05g0040 431 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0040 431 Gene3D Phosphorylase Kinase; domain 1 25 110 - -
Alju05g0040 431 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0040 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0040 Alju-ChrAlju05 368267 369562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0040 11 426 CBL-interacting serine-threonine protein kinases AT2G30360 55.765 5.48e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju05g0040 Pkinase 1.8e-66 CL0016