Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0031 ATGATGCACTTCTTGTTGTTTCTTCTCTTTCTTTTTGCTCCAGTCACAGTACTTTCCGACGACCCAGCCTTCAACGACGACGTGTTGGGTTTGATTGTCTTCAAAGCTGGTTTGCAAGACCCGGAAGGTAAGCTTTCTACTTGGAACGAAGATGACAATAATCCCTGCAAGTGGGCTGGAGTCAAATGTGATCCTACAACCAATCGGGTCTCTGCCATTGTGCTTGACGGCTTTTCTCTTTCTGGGCACATTGATCGAGGGCTCCTGAGATTACAGTCCCTTCAAATTCTCTCACTTTCCAAGAACAACTTCTCTGGGTCCATAAACCCAGATCTTCTTCGGCCTGGGAGTTTACAAGTTTTGGACTTCAGTGAGAACAACCTCTCTGGGTCTATACCAGAAGGGTTCTTCCGCCAATGTGGATCCTTAAGATCAGTTTCATTTGCCAAAAACAAGCTTACTGGTAAGATTCCTGATTCCTTGAGTTCTTGCACCTTGTTAGTAACTGTTAACTTCTCTTCCAACCAGCTAAATGGGAATTTACCTTCTGGGATATGGTTTTTGAGACAACTACAGTCACTCGATCTATCAAATAACTTTCTGGAGGGAGAGATTCCTGAGGGAATTGAAAATTTGTATGATTTGAAGGAGTTAAATTTGCAGAGGAATCGCTTCATTGGAAGGCTTCCTGGTGATATTGGAGGATGCATGCTTTTAAAGTCACTTGATTTGAGTGATAATTTTCTCTTTGGGACAATTCCTGAGTCAATGCAGGGACTCAACTCCTGCACATCCCTCAATTTACACGGGAATTCACTCACTGGAGCAGTTCCTGATTGGATTGGGGAATTAAAAAATCTGGAGATGTTGGATCTTTCAGCAAATAGATTTTCTGGTTTGATTCCAAAATCAATAAGCAATCTCAACTCACTGAATAAATTAAATCTATCCAGGAATCATTTTGCTGGAAACTTGCCGGAATCAATGGCAAGCTGTGTTAAGCTTTTGGCTCTAGACGTCAGCCAAAATCAGTTAGAAGGCCGTCTTCCCTCATGGATTTTCAGGATGGGCTTACGAAGTGTTTCACTTTCAGGGAACAGCTTCAATAGCAGCAATTATCCTTTATTTACCTCCTCACCTGAATCTTATCATGGTCTTCAGGTTTTGGACTTGTCGTCAAATGCGTTTTCTGGCGAACTTCCTTCTAATATTGGGGGCCTTAGTAGCTTGCAAGTATTAAATATGTCCGCCAACAATATCTCTGGTCCTATTCCAGTGGGTATAGGAGACCTTAAATCTTTATACATTCTTGATTTCAGTGACAACAAACTTGATGGAAGTATTCCTCCTGAACTAGAGGGGGCTTTTTCACTCGGTGAACTGCGGTTACAGAACAACTTCCTAAGTGGGGAGATTCCAGCCCAAATTGAAAAGTGCTCTTCGCTAACAACTTTGATTCTTTCTCATAACAAACTTACCAGTTCAATCCCAGCCGCCATTGCAAACTTGACTAATCTTCAGTATGTAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCCAAAAATCTCTCAAATCTTTCCCACCTTTTATTTTTTAATGTCTCTTACAACCACCTTCAAGGGGAGCTACCAGTGGGCGGCTTCTTCAATATCATCTCTCCCTCATCTGTCACTGGCAATCCATCCCTATGTGGTTCTGTTGTCAATCATTCCTGCCCTTCAGTCCATCCCAAACCTATTGTCCTAAACACCAATTCTTCTTACTCCAACTCCAACTCCTCTCAAAACCATGGTCATAAAAAGATCATACTAAGCATTTCTTCTCTTATTGCTATTGGTGCTGCTGCTATTATCACTGTTGGCGTGGTGGCCATTACTGTCCTAAATGCCCATGTTCGCCATTCAATGTCTCGTTCTGCTGCCCCATTTTCATTCTCTGGTGGTGAGGACCATAGTTGTTCTCCTGAAAATGATCCAAACTATGGCAAGCTTGTTATGTTTTCTGGTGAAGCTGGTTTTGATGACGGGGCAAATAATCTCCTAAACAAAGACAGTATAATAGGTCGTGGTGGGTTTGGAATTGTTTATCACACTGTCCTTCGAGATGGGCATTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGATTGATCAAGTCACAAGAAGACTTTGAGAGGGAAGTGAAAAATCTTGCGACAATCAAACACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATCTATCCAGAGGGAGTCTGCATAAGCTCCTACATGAAGATGAGCATGGCAGCAACATGCTTTCTTGGCGACAAAGGTTCAAGATTATTCTTGGAATGGCAAAAGGGTTGGCTCATTTGCATCAAAAGAATATAATTCACTACAATCTAAAATCAACGAATATTTTGATTGATTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTGTTGCCAGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGTTACATGGCCCCTGAGTTTGCATGCCGGACGGTGAAGATAACTGAGAAATGTGATGTGTATGGTTTTGGGATCCTGGTTCTTGAGGTGGTGACCGGGAAAAGACCGGTGGAATACATGGAGGATGATGTGGTTGTTCTGTGTGATATGGTAAGGGGTGCATTGGAGGAAGGCAGGGTGGAGCAATGCGTGGACAGGAGGCTCCTGGGCAATTTTGCTGCTGAGGAAGCAATTCCTGTGATTAAATTGGGATTAATTTGTGCATCACAAGTGCCTTCAAACCGCCCAGATATGGCTGAGGCAGTTAATATATTAGAGTTGATCCAATGCCCTTCAGAAGGACTAGAGGAATTAGAATGA 2901 0.4261 MMHFLLFLLFLFAPVTVLSDDPAFNDDVLGLIVFKAGLQDPEGKLSTWNEDDNNPCKWAGVKCDPTTNRVSAIVLDGFSLSGHIDRGLLRLQSLQILSLSKNNFSGSINPDLLRPGSLQVLDFSENNLSGSIPEGFFRQCGSLRSVSFAKNKLTGKIPDSLSSCTLLVTVNFSSNQLNGNLPSGIWFLRQLQSLDLSNNFLEGEIPEGIENLYDLKELNLQRNRFIGRLPGDIGGCMLLKSLDLSDNFLFGTIPESMQGLNSCTSLNLHGNSLTGAVPDWIGELKNLEMLDLSANRFSGLIPKSISNLNSLNKLNLSRNHFAGNLPESMASCVKLLALDVSQNQLEGRLPSWIFRMGLRSVSLSGNSFNSSNYPLFTSSPESYHGLQVLDLSSNAFSGELPSNIGGLSSLQVLNMSANNISGPIPVGIGDLKSLYILDFSDNKLDGSIPPELEGAFSLGELRLQNNFLSGEIPAQIEKCSSLTTLILSHNKLTSSIPAAIANLTNLQYVDLSWNELSGSLPKNLSNLSHLLFFNVSYNHLQGELPVGGFFNIISPSSVTGNPSLCGSVVNHSCPSVHPKPIVLNTNSSYSNSNSSQNHGHKKIILSISSLIAIGAAAIITVGVVAITVLNAHVRHSMSRSAAPFSFSGGEDHSCSPENDPNYGKLVMFSGEAGFDDGANNLLNKDSIIGRGGFGIVYHTVLRDGHSVAIKKLTVSGLIKSQEDFEREVKNLATIKHQNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHEDEHGSNMLSWRQRFKIILGMAKGLAHLHQKNIIHYNLKSTNILIDCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEQCVDRRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEAVNILELIQCPSEGLEELE 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0031 966 Pfam Protein kinase domain 684 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0031 966 SMART LRR_typ_2 212 236 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 503 526 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 91 115 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 308 332 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 407 431 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 116 139 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 527 551 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 479 502 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 284 307 IPR003591 -
Alju05g0031 966 SMART LRR_typ_2 188 211 IPR003591 -
Alju05g0031 966 SMART LRR_sd22_2 284 310 - -
Alju05g0031 966 SMART LRR_sd22_2 431 454 - -
Alju05g0031 966 SMART LRR_sd22_2 188 211 - -
Alju05g0031 966 SMART LRR_sd22_2 503 529 - -
Alju05g0031 966 SMART LRR_sd22_2 239 262 - -
Alju05g0031 966 Gene3D Ribonuclease Inhibitor 287 576 IPR032675 -
Alju05g0031 966 ProSiteProfiles Protein kinase domain profile. 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0031 966 CDD STKc_IRAK 688 955 - -
Alju05g0031 966 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 759 961 - -
Alju05g0031 966 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
Alju05g0031 966 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Alju05g0031 966 SUPERFAMILY Protein kinase-like (PK-like) 684 956 IPR011009 -
Alju05g0031 966 SMART serkin_6 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0031 966 Pfam Leucine rich repeat 385 444 IPR001611 GO:0005515
Alju05g0031 966 Pfam Leucine rich repeat 264 321 IPR001611 GO:0005515
Alju05g0031 966 Pfam Leucine rich repeat 458 516 IPR001611 GO:0005515
Alju05g0031 966 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Alju05g0031 966 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 676 758 - -
Alju05g0031 966 SUPERFAMILY L domain-like 50 303 - -
Alju05g0031 966 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 577 - -
Alju05g0031 966 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Alju05g0031 966 Gene3D Ribonuclease Inhibitor 184 280 IPR032675 -
Alju05g0031 966 Gene3D Transferase(Phosphotransferase) domain 1 759 957 - -
Alju05g0031 966 PANTHER OS05G0588300 PROTEIN 188 278 - -
Alju05g0031 966 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Alju05g0031 966 SUPERFAMILY RNI-like 252 551 - -
Alju05g0031 966 Gene3D Phosphorylase Kinase; domain 1 675 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0031 Alju-ChrAlju05 283166 286174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0031 1 965 Receptor kinase-like Gene Family AT3G56370 62.204 0.0 1140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Alju05g0031 Pkinase 1.4e-41 CL0016