Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0028 ATGTGGAACTTTCATAGCCAGCTTCCTTCGCCCCCCCGGGGAAAAATGGAGAATCTTCCTTCGGATCGTAGAAAGGCAATCGAGGAACTGGAGAGAGGCCGTGAGTTTGCCACCCAGCTCCGCGGTCTGGTTCTCAACCCCAGCGGCGAGGGAACGATGCCGTCTGCCCAAGATCTTGCGGACAAGGTGGTGACCTCCTTTTCCAACACGCTTTTGCTCTTGAATCTCCCCTCTCACGATTCCCAGATGCAACAATATTCTTCTTGTGTTCTTCCCGCTAAATCTGACGACTCTGAAGATAGTTGCAAGAGCACTTCCGCCGTTAGGGAACGAAGAGGCTCTTATAAGAGAAGGAGAACATCACAAACATCGGAGATAGACTCCGAAGCTCCGATTGATGATGGCCATGCGTGGAGAAAGTATGGTCAAAAGAATATAATGAATGCCACATACCCAAGGAACTACTTCAGATGCAGTCACAGGTTTGACCAGGGGTGCCAAGCAACCAAACAGTTGCAGAGAATTCAAGAGAAGCCTGAGCTGTACAGGACAACTTACTATGGCCAACACACCTGCAACAGAAACTCGCTGAACAACGAGATCATTTTGGATGCTAATTCTCCTTCTCACCGTTCCCTATTTATCAGTTTTGACAATAATCTCCCCACCGAACAGGCCATCTTCTCATCACCACCATCTCTTCCCATTCCCATGACAGGAACACGGTGTAAGGAAGAGATTCCCTCATCTTCATCGGAGGATTACGTTCTCTCCCCTGAATCAGACCACAAGGATCCCATTTCTGATATGTTGTGCGGTGATTTTGCCTTTGGGCCCTTTGATTATTTAGACGGCTGA 858 0.486 MWNFHSQLPSPPRGKMENLPSDRRKAIEELERGREFATQLRGLVLNPSGEGTMPSAQDLADKVVTSFSNTLLLLNLPSHDSQMQQYSSCVLPAKSDDSEDSCKSTSAVRERRGSYKRRRTSQTSEIDSEAPIDDGHAWRKYGQKNIMNATYPRNYFRCSHRFDQGCQATKQLQRIQEKPELYRTTYYGQHTCNRNSLNNEIILDANSPSHRSLFISFDNNLPTEQAIFSSPPSLPIPMTGTRCKEEIPSSSSEDYVLSPESDHKDPISDMLCGDFAFGPFDYLDG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0028 285 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g0028 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 28 206 IPR044810 GO:0003700
Alju05g0028 285 MobiDBLite consensus disorder prediction 1 21 - -
Alju05g0028 285 MobiDBLite consensus disorder prediction 242 268 - -
Alju05g0028 285 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g0028 285 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g0028 285 MobiDBLite consensus disorder prediction 96 128 - -
Alju05g0028 285 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g0028 285 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g0028 285 MobiDBLite consensus disorder prediction 92 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0028 Alju-ChrAlju05 263913 265278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0028 16 196 WRKY Transcription Factor Family AT3G56400 39.153 1.82e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju05g0028 WRKY 1.6e-23 CL0274