Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju05g0024 | ATGGGGAACTGCATGGCTCGGCCTTCATCTAAGGATGACAATTCTGATCATCACGTGGACTTTGCTGCTGGGAATGTACAACTTATTACTTCCAAAGAATCTTGGGACCAGAAGATGGAAGAAGCTAGAAAGGATGGCAAAATTGTGATTGCAAACTTCAGTGCATCATGGTGTGGCCCTTGTAAGATGATTGCACCTTATTTCTGTGAGTTATCGGAGAAATATCCATCAGTTATGTTCTTGCTAATTGACGTCGATGAACTCACTGACTTTAGCACTTCCTGGGATATCAAAGCCACTCCAACTTTCTTCATTCTCAGAGATGGGAAACAGATTGACAAACTGGTAGGAGCCAACAAACCTGAGCTACTGAAGAAAATTGTTGCCATTACTGATTCAATAGTTCAGTATCAATAA | 417 | 0.4125 | MGNCMARPSSKDDNSDHHVDFAAGNVQLITSKESWDQKMEEARKDGKIVIANFSASWCGPCKMIAPYFCELSEKYPSVMFLLIDVDELTDFSTSWDIKATPTFFILRDGKQIDKLVGANKPELLKKIVAITDSIVQYQ | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju05g0024 | 138 | Pfam | Thioredoxin | 29 | 127 | IPR013766 | - | |
| Alju05g0024 | 138 | ProSitePatterns | Thioredoxin family active site. | 50 | 68 | IPR017937 | - | |
| Alju05g0024 | 138 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Alju05g0024 | 138 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - | |
| Alju05g0024 | 138 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Alju05g0024 | 138 | SUPERFAMILY | Thioredoxin-like | 22 | 127 | IPR036249 | - | |
| Alju05g0024 | 138 | CDD | TRX_family | 33 | 129 | - | - | |
| Alju05g0024 | 138 | Gene3D | Glutaredoxin | 1 | 137 | - | - | |
| Alju05g0024 | 138 | PANTHER | THIOREDOXIN | 26 | 127 | - | - | |
| Alju05g0024 | 138 | ProSiteProfiles | Thioredoxin domain profile. | 6 | 132 | IPR013766 | - | |
| Alju05g0024 | 138 | FunFam | Thioredoxin | 23 | 132 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju05g0024 | Alju-ChrAlju05 | 242721 | 245398 | Dispersed/Wgd |