Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0007 ATGCCTGCAAATTCTGAGGGCACTACATCCGCATTAAATCGGTCTAATTCTCAGGTTTTTGAGGACACTTCCCTGCTAGTTGACCATTCTGCCCGGACTGCTGTATGTGCTCTCTGCCAAAGGGCTCTATCACCTGATATTGAGATAACGAATGATCTTGCACCCATTGGTGTATGTGGTGATTGTAAATTTTTATTACTTGAAGATTTTGGGACCCGTTCCCAAAACTCTCAAAGAATGCATAGGGGAGGATCCAGGTACAGCAGTTTTGAATCAATTGAGAATGTTTTATCACATCAGCTCCCCAGCATGGCTAATTCTGTGAGACAAAATCAATCCTTTGCATCTGTGGAGGATGATCAACTTGGTGATGGTGATACCCCCTCTTGGTTGTTGCGGTATGCTAGTACTCATACTACCCCTAGCGAGTCTCGTAGATGGAGGCGGGTTTTCTCTGATACTGATAGTGATGGTTTTGATAATTGGAGTTCTCTTTATGGTGAGAATGAGTCAAATGCAAGTATTAGGTGCTACAGGGTCACCAATGGCGAGACTGATTCCTTCTCTTTCAGTGCTTATGGTGGTGACTCTGAAGCATCTATGGATAGATATAGTTTTGTAGGCACAGGAATATTAAATATACCAGATGAGGGTGATGAATTTGATAGTGACACTGATATAGATCCAATGCATGCTGGCCTTAGCCATTGGAATTCTGATGATATGGAAGGGGAGGGTGAGGATGAGGAAGAGGAAGAGGAAGAAGAGGAAAGAGAATGGGAAGTAGCTGAGGCTGAGGAAGCTGAAGCCACTGCTCGCCTTCAAATATTTTTTACTTCAAGTCCCAGTGAGAGAAGTGACCCTATTAATTGGGGTCCACAGTTTCATTTTCCTGAATCCGAGGAAATATTAAGTAGGAGAGTTGGGGATAGATGGCAAACTTACACTGATCAAAGCTCCAATTACTTGGAGGAGGCACATTCACCTCCTTATGGTGCAAATTTTGGGGATTATCTTGATGCTAGACAATTTGAAGATCTGCTTGAGCATCTTGCTGATAATGACAACTCAAGACGAGGAGCACCTCCTGCAGCAGTGTCTTTTGTACATAGTCTGCCCCGTGTTGTTATAAGCAAAGAACATGAGAAGCATGATGAACTTGTATGTGCCATTTGCAAGGATGGCTTGGCCATAGGCACTGAAGTAAATCAGCTTCCCTGCTCTCACCTTTATCATACCTGCTGCATTTTTCCATGGTTGAGTGCACGTAATTCTTGCCCCCTTTGTCGTTATGAGCTCCCAACAGATGATAAGGATTATGAGGAAGGAAAGCGCAATATTGACATTAGAAATGAGATCCATGAAGTGCAGCAACTAGATGTGATGGATGGCAATTCTTCTGATGGATCTGAAGCAAATGAAGAGGATGGTACTAATCAAGGTGGAGTACAGCAAAGTGAGCTTGTGAATATGGTTCCTGTAGATAATCCTTCTGCAGTGAGTGGCAGTAGAGGAAGATGGTTTTTCTTTGCTGCTGCTCCAATTGTTAGCCTAGTAGGTATTGTTATTGTCTTATGGTTAGGCAACCCTCTAATTGAGCGTAGTAGACAACTGAGCTGCCACAACTTACAGGGGCCAAATCGGCATCAAGTTCATGTTTCCGCCTCACCCAACCACAGGGAGGATAGAAGCAGAAGATGGTGGTGTTTTTTCTAA 1716 0.4353 MPANSEGTTSALNRSNSQVFEDTSLLVDHSARTAVCALCQRALSPDIEITNDLAPIGVCGDCKFLLLEDFGTRSQNSQRMHRGGSRYSSFESIENVLSHQLPSMANSVRQNQSFASVEDDQLGDGDTPSWLLRYASTHTTPSESRRWRRVFSDTDSDGFDNWSSLYGENESNASIRCYRVTNGETDSFSFSAYGGDSEASMDRYSFVGTGILNIPDEGDEFDSDTDIDPMHAGLSHWNSDDMEGEGEDEEEEEEEEEREWEVAEAEEAEATARLQIFFTSSPSERSDPINWGPQFHFPESEEILSRRVGDRWQTYTDQSSNYLEEAHSPPYGANFGDYLDARQFEDLLEHLADNDNSRRGAPPAAVSFVHSLPRVVISKEHEKHDELVCAICKDGLAIGTEVNQLPCSHLYHTCCIFPWLSARNSCPLCRYELPTDDKDYEEGKRNIDIRNEIHEVQQLDVMDGNSSDGSEANEEDGTNQGGVQQSELVNMVPVDNPSAVSGSRGRWFFFAAAPIVSLVGIVIVLWLGNPLIERSRQLSCHNLQGPNRHQVHVSASPNHREDRSRRWWCFF 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0007 571 MobiDBLite consensus disorder prediction 460 484 - -
Alju05g0007 571 FunFam E3 ubiquitin-protein ligase RING1-like 350 436 - -
Alju05g0007 571 ProSiteProfiles Zinc finger RING-type profile. 389 430 IPR001841 -
Alju05g0007 571 Coils Coil 239 271 - -
Alju05g0007 571 MobiDBLite consensus disorder prediction 218 266 - -
Alju05g0007 571 SMART ring_2 389 429 IPR001841 -
Alju05g0007 571 SUPERFAMILY RING/U-box 370 437 - -
Alju05g0007 571 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 266 434 - -
Alju05g0007 571 MobiDBLite consensus disorder prediction 458 484 - -
Alju05g0007 571 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 436 IPR013083 -
Alju05g0007 571 MobiDBLite consensus disorder prediction 242 264 - -
Alju05g0007 571 Pfam Ring finger domain 389 430 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0007 Alju-ChrAlju05 103096 104811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0007 29 571 C3H Transcription Factor Family AT5G01980 41.441 3.68e-120 362