Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2441 ATGGCTCTTTCTATGCACAAAGATTCACCGAGCAAGCAGATGGATACAAGCAAGTACGTTAGGTATACGCCTGAGCAGGTGGAGGCTTTGGAGAGGGTATATACAGAATGCCCAAAACCCAGTTCTTTGAGGAGACAACAGCTCATTAGGGAGTGTCCTATACTTTCTAACATTGAACCCAAACAGATCAAAGTTTGGTTTCAGAACCGAAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCACGGCTGCAGACAGTAAATAGGAAGCTCACTGCAATGAACAAGTTGTTAATGGAAGAGAATGATCGACTGCAGAAACAGGTGTCACAGTTGGTCTATGAAAATGGATACATGAAACAACAGATACATACTGTATCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAACAACAACAGCAAAACCCAACACCTCAGCATCCCCAGAGGGATGCCAATAACCCAGCTGGTCTTCTGGCGATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGCAATTGTAGTGGAGTTGCAGCACGAGCTTGTGGCCTCGTGAGCCTAGAGCCCACGAAGGTATCTGATATTCTTAAAGATCGTCTATCTTGGTATCATGATTGCCGCTGCCTTGATGTGGTAAACTCATTCCCCACTGGGAATGGGGGAACAATTGAACTCTTGTACATGCAGACTTATGCACCCACAACATTGGCAGCAGCACGTGAATTTTGGACTCTTAGATATAGTACAAATATGGAAGATGGAAGTCTTGTGGTATGTGAGAGGTCATTGACCTCTTCAACTGGTGGCCCCACAGGGCCTCCTTCATCAAACTTTGTTAGAGCTGAAGTGCTTCCTAGTGGTTATCTAATTAGGCCCTGTGAGGGTGGCGGATCCATTATTCACATTGTCGATCATGTGGATTTAGATGCTTGGAGTGTTCCTGAAGTGCTGAGGCCCCTTTACGAATCATCAAAAATCCTTGCTCAGAAAATGACTATTGCTGCCTTGCGACATATAAGGCAAATTGCTCAAGAAACAAGTGGAGAAATTCAATATGGTGGGGGCCGCCAGCCAGCTGTTTTAAGAACATTTAGTCAGAGACTAAGCAGGGGCTTCAATGATGCTGTGAATGGGTTTGTGGATGATGGCTGGTCACTAATGGGTAGTGATGGTGCTGAGGACGTGACCATAGCCATTAACTCATCTCCGAATAAGTTTTTCGGTTCCCACTATGGTACCTCAATGTTCCCTGCATTTGGAGGCGGGGTGTTATGTGCTAAGGCATCAATGCTACTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGCTTTCTGAGGGAACATCGCTCTGAGTGGGCTGATTATGGGGTTGATGCATTCTCTGCTGCGTGTCTCAAGGCTAGCCCTTATGCAATTCCTTGTGCAAGGCCTGGTGGCTTTCCGAGCAGTCAGGTCATTTTGCCACTTGCTCATACTATTGAACATGAAGAGTTCTTGGAGGTAGTTCGTATAGAGGGTCATGCATTTTCCCCTGAAGATGTGGCTCTTACCCGGGATATGTATCTTCTGCAGCTATGCAATGGAATTGATGAGAATGCAATTGGATCATGTGCTCAACTTGTGTTTGCACCTATTGATGAATCATTTGCTGATGATGCTGTCTTGCTTCCTTCTGGCTTCCGTGTCATACCATTGGACCCTAAAACAAATGGAACAGCAGCAAATAGAACTTTGGATCTGGCATCTACGCTTGAAGCTGGATCTGGCAATGTCCGAGCACCTGGTGACACTGATCCGAACAATTACAATCTTAGGTCGGTCCTTACCATTGCATTTCAATTTATGTTTGAGAACCATATGCGGGACAATGTGGCTGCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGGTCTGTTCAGAGAGTTGCCATGGCTATTGCTCCCTCTCGGCTCAGCACCCAGCTCTCACCAAAGTCTCTTCCTGGTTCTCCAGAGGCTCTTACTTTAGCACGATGGATCTGCAGAAGCTACAGGATTCACACTGGGGGTGAGATTTTTAATGTTGAGTCCACGGCAACTGATGCAATTTTGAAGCAGCTTTGGCATCATTCAGATGCAATCATGTGCTGCTCTGTGAAAGCAAATGCATCCCCGGTTTTCACCTTTGCAAACCAGGCTGGACTGGACATGCTTGAAACCACTCTTGTGGCCCTTCAAGACATAATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATCCTCTGCTCGGAGTTCGCCAAGATAATGCAGCAGGGGTTTGCTTATCTGCCAGCTGGAATATGCGTGTCGAGCATGAACAGGCCAGTGTCGTATGAGCAATCCATTGCCTGGAAAGTTCTGAATGATGATGATTCCAATCACTGCCTTGCCTTCATGTTCATGAACTGGTCTTTTGTCTGA 2538 0.4661 MALSMHKDSPSKQMDTSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMKQQIHTVSATTTDNSCESVVMSGQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVSDILKDRLSWYHDCRCLDVVNSFPTGNGGTIELLYMQTYAPTTLAAAREFWTLRYSTNMEDGSLVVCERSLTSSTGGPTGPPSSNFVRAEVLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLMGSDGAEDVTIAINSSPNKFFGSHYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAFSAACLKASPYAIPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALTRDMYLLQLCNGIDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGTAANRTLDLASTLEAGSGNVRAPGDTDPNNYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLSPKSLPGSPEALTLARWICRSYRIHTGGEIFNVESTATDAILKQLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFAKIMQQGFAYLPAGICVSSMNRPVSYEQSIAWKVLNDDDSNHCLAFMFMNWSFV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2441 845 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Alju04g2441 845 MobiDBLite consensus disorder prediction 136 156 - -
Alju04g2441 845 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Alju04g2441 845 Pfam START domain 166 373 IPR002913 GO:0008289
Alju04g2441 845 SMART START_1 165 375 IPR002913 GO:0008289
Alju04g2441 845 SUPERFAMILY Bet v1-like 166 377 - -
Alju04g2441 845 SMART HOX_1 15 81 IPR001356 GO:0003677
Alju04g2441 845 CDD homeodomain 18 78 IPR001356 GO:0003677
Alju04g2441 845 Coils Coil 87 114 - -
Alju04g2441 845 Gene3D - 199 382 IPR023393 -
Alju04g2441 845 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Alju04g2441 845 Gene3D - 10 84 - -
Alju04g2441 845 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Alju04g2441 845 CDD bZIP 70 109 - -
Alju04g2441 845 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Alju04g2441 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 845 IPR044830 GO:0003700
Alju04g2441 845 CDD START_ArGLABRA2_like 160 376 - -
Alju04g2441 845 MobiDBLite consensus disorder prediction 136 158 - -
Alju04g2441 845 SUPERFAMILY Bet v1-like 413 600 - -
Alju04g2441 845 Pfam MEKHLA domain 700 844 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2441 Alju-ChrAlju04 57231554 57237925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2441 5 845 Homeobox Transcription Factor Family AT2G34710 79.527 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju04g2441 START 1.1e-50 CL0209