Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2430 ATGAAAGAAGGAGGAAGGAAGCAGGGTGCTGCGTCACCGTGTGCTGCTTGCAAGCTGCTTCGAAGAAGATGTGCTAACGACTGTGTCTTCGCTCCTTATTTCCCCGCCGATGAGCCTCACAAGTTCGCTAATGTCCACAAAGTCTTCGGAGCCAGTAATGTCAACAAGATGCTTCAGGAGTTACCAGTGCATCAAAGAGGGGATGCAGTGAGCAGTATGGTGTATGAGGCAAATGCAAGAGTGAGAGATCCAGTGTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATTTGCTTCAGACCCAATTGGCCTTAGCCCAGGCTGAGGTGGTTCATCTTAGGGTTAGCCAATCTGCTTCCCTTTCCAACCATGGGCTCAGCCCAACTAGCAGCGACTCGCCGCCGCCTTCAAAGTCCATTCTCGACATGGACTTTGTGATGGACCAGTCCACTTACTCTGATTCAATTTCACAGGCATTCCAAGTAGAATATACACAAATCAAGCGCCAAGATATGACACCATCAATCTAA 540 0.4907 MKEGGRKQGAASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAEVVHLRVSQSASLSNHGLSPTSSDSPPPSKSILDMDFVMDQSTYSDSISQAFQVEYTQIKRQDMTPSI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2430 179 Coils Coil 92 112 - -
Alju04g2430 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 140 - -
Alju04g2430 179 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Alju04g2430 179 MobiDBLite consensus disorder prediction 124 144 - -
Alju04g2430 179 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Alju04g2430 179 MobiDBLite consensus disorder prediction 124 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2430 Alju-ChrAlju04 57124261 57126931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2430 1 159 AS2 family AT1G31320 71.598 4.41e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju04g2430 LOB 1.3e-43 No_clan