Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2419 ATGGATATAGTGTTCAAAGAAAATCCAGCCAAGCGTACAATCAGTGTGGGACGTAGCTTCAATCCTTCAAATCCTCCCTTGTTACATCAGGATCTTCGCAATGGCATAATTGCTCTACAGGGATTTCAACACAGTTTGAAGCCCACATCTCAAGGGAAAGATCAGAATCTCACAAATCTTGCTCTTACGATCAATGCTAAACTTGGAGGTAGTAACATTGAGCTTGAGAATAGGCTCGCTTGCTTTGCAGTCAATTGGCCTGGCGCAAATCGTTACGCGGCACGTGTTAGCCCTCAGTCCCATCGAAAAGAACAAATATTGAATTTTGGGACAATCTGCCTTGAGCTTGTTGACTGCTACGCCAGGTTTAACGAAGTGAGACCCAAGAAAATTGTTATTTTCTGTGATGGAGTCAGTGTGGGTCAGTTTGACATGGTTCTTAACGAAGAACTACGAGATCTGAAAAGTGTTTTCCAAAATGCAAAGTATTTTCCAACTATAACTTTGGTTGTAGCACAGAAGCGACATCAAACTCGCTTGTTTCGAGAGGAGCCTTCTTCGGGAAATGTGTATCCTGGAACAGTGGTGGACACAAAAGTGGTACACCCTTCTGAGTTTGATTTCTACCTTTGCAGTCACAGTGGAAGCTTAGGGACCAGCAAGCCCACCCACTATCATGTCTTGTGGGATGAGCACAGGTTTACCTCTGATGATTTACAGAAACTCATATATGATATGTGTTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTGGTCCCTCCTGTATACTATGCTGACCTTGCTGCTTATCGAGGAAGACTATACTATGAGGCCAAGACTGAGTTAGAGAGCTTTAACAGGGCAGCATCGTCTCCTGCTTCATCTGCAAATGAAGACAAGAATTTCAGGCTGCACGAGAATGTGGAGGACAAAATGTTCTTTGTCTAA 951 0.4332 MDIVFKENPAKRTISVGRSFNPSNPPLLHQDLRNGIIALQGFQHSLKPTSQGKDQNLTNLALTINAKLGGSNIELENRLACFAVNWPGANRYAARVSPQSHRKEQILNFGTICLELVDCYARFNEVRPKKIVIFCDGVSVGQFDMVLNEELRDLKSVFQNAKYFPTITLVVAQKRHQTRLFREEPSSGNVYPGTVVDTKVVHPSEFDFYLCSHSGSLGTSKPTHYHVLWDEHRFTSDDLQKLIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEAKTELESFNRAASSPASSANEDKNFRLHENVEDKMFFV 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2419 316 SMART Piwi_a_2 13 278 IPR003165 GO:0003676
Alju04g2419 316 Gene3D - 76 316 IPR036397 GO:0003676
Alju04g2419 316 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 51 281 - -
Alju04g2419 316 SUPERFAMILY Ribonuclease H-like 51 278 IPR012337 -
Alju04g2419 316 Pfam Piwi domain 77 277 IPR003165 GO:0003676
Alju04g2419 316 Pfam Argonaute linker 1 domain 15 65 IPR014811 -
Alju04g2419 316 ProSiteProfiles Piwi domain profile. 127 278 IPR003165 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju04g2419 Alju-ChrAlju04 57008747 57012538 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2419 55 315 Eukaryotic Initiation Factors Gene Family AT5G43810 37.072 3.11e-62 211