Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2356 ATGCAAAGGGAAATGGCGAGAAGCTTGATTCACCGATCCTCCGCCTTTCGTTGGGCAATAGAGAATAGATGTTGCCCCATCTCTAACAATGTTCGCTCAGATTCAGTCGGAACATTGACCTCTGCATCCGCAACTATATCCCCATCTCCACCGTCAAAGTCCTTCAATACCTCCTCGTTTTCTACCATCGCCTCCATCACTCCTCCGCTGCTCTCAGCTCTGCTGTCATCCTGCCATTATCGTCGCTTTAGCTCCGCTTCAGGTGCTTCGAACATTGTCCATGTCAAGACAGAGGAAGAGTTTAATAATATCCTTAGCAAAGTACAAGATCAATCACTGCCTGCGATCTTCTATTTCACTGCAGTTTGGTGTGGACCATGCAGGTTCATTTCTCCTGTCATTGAGGATCTCAGTGGGAAATATCCTCATGTGACAACATATAAGATTGACATTGATCAGGAAGCAATTCAAGGCACGTTGGGCAAATTAATGATTACAGCTGTGCCAACACTCCATTTCTTTCAGAATGGAAAAAAGGCTGATGAGGTTATTGGAGCTGATGTTGGGCGTCTGACCTATATTGTGGAGAAACTCTTCAATTTAGGGTTTCGTTTGCGCCGTTCTGATTTCTCTCAGCTCCTGCTTCGATTCCGCTCCTCCGAGACGACAATGGTGAAGGGCCGCCAGGGTGAACGTGTTAGACTGTACGTGAGAGGGTCAATCCTTGGATACAAGAGGTCCAAGTCAAACCAGTATCCTAACACCTCTCTTATTCAAATCGAAGGGGTGAACACCAAGGAAGAGGTAGCATGGTATTGTGGCAAGCGAATGGCATATATTTACAAGGCCAAGGTTAAGAAGAATGGAACCCATTACCGCTGCATTTGGGGTAAGGTTACCAGGCCTCATGGTAACAGCGGTGTTGTCCGAGCAAAGTTCAAATCAAATCTTCCACCCAGATCAATGGGAGCCAAGGTTAGAGTATTCATGTACCCCAGCAACATATGA 1008 0.4633 MQREMARSLIHRSSAFRWAIENRCCPISNNVRSDSVGTLTSASATISPSPPSKSFNTSSFSTIASITPPLLSALLSSCHYRRFSSASGASNIVHVKTEEEFNNILSKVQDQSLPAIFYFTAVWCGPCRFISPVIEDLSGKYPHVTTYKIDIDQEAIQGTLGKLMITAVPTLHFFQNGKKADEVIGADVGRLTYIVEKLFNLGFRLRRSDFSQLLLRFRSSETTMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGAKVRVFMYPSNI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2356 335 Pfam Ribosomal protein L35Ae 235 329 IPR001780 GO:0003735|GO:0005840|GO:0006412
Alju04g2356 335 PANTHER 60S RIBOSOMAL PROTEIN L35A 225 335 IPR001780 GO:0003735|GO:0005840|GO:0006412
Alju04g2356 335 ProSiteProfiles Thioredoxin domain profile. 83 219 IPR013766 -
Alju04g2356 335 Gene3D translation elongation factor selb, chain A, domain 4 229 335 IPR038661 -
Alju04g2356 335 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 237 329 IPR001780 GO:0003735|GO:0005840|GO:0006412
Alju04g2356 335 Gene3D Glutaredoxin 87 200 - -
Alju04g2356 335 Pfam Thioredoxin 93 187 IPR013766 -
Alju04g2356 335 FunFam 60S ribosomal protein L35a 230 335 - -
Alju04g2356 335 CDD TRX_family 99 187 - -
Alju04g2356 335 ProSitePatterns Ribosomal protein L35Ae signature. 297 318 IPR018266 GO:0003735|GO:0005840|GO:0006412
Alju04g2356 335 FunFam Thioredoxin 89 200 - -
Alju04g2356 335 SUPERFAMILY Thioredoxin-like 84 198 IPR036249 -
Alju04g2356 335 SUPERFAMILY Translation proteins 235 329 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2356 Alju-ChrAlju04 55984149 55993710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2356 224 335 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 90.179 2.44e-72 218