Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2326 ATGTATGAGCATACATCATCCTTTGATCCCAACACAATGGCAGATGGCACTGTTTCCCTAAAAGACGGACTTCCCGATGCACCGCAGTTCATGGCTGCCGGAAACCTCACAAGCAGTAACAATAACTTGGACGAAAATCTCAAGCTCACAGTGGAAGAGCTCTCCTATCACCAGCACCAGAATCATCCACCGCCACACCCAGAAGACGTCTCCGCCTTTGCTAACGGCGTCGCCGCCGCCGCCGCCTCACCATTGGATATCTCACACCCTCAACATCTTGTTCTGAACGTAGAAAATCCCTACAACAGTGAGACTTTGGTTCATCAAGTCATGGATGTCCTCAATTATGATCAATCCACTTGGGACCCTAAAATTCAAGAGTTTCAGGGTGTGAATTATTCTAACCACTACCACCAAGAACAACAGCAACCTCAACAATTTCATCAAATTGAGACCCAAAGCCACAATTCGTTTTCAATACTCGACCCTCCTCCTCCGTACCCTCCTTCTAATCTGCTCGATCTCCTCCATTACAACCCAACCCAGAAGATACCAAATATCCCAAATTCCATGGGTTTTCTGGGCGACATTCCTATGGGATCAGATAGCACAAGCGCGTGTTCAGTATTGTATGATCCTCTGCTTCATTTGAATCTGCCTCCACAGCCTCTGGCGCTAAGAGAGCTGTTTCAGTCTCTTCCTCGAGGCTATAGCTTGCCAACTAGTTCCAGAAATGGTTCTCTTTTTGGTGGTGGGGATGAGATTGAGGGGAATGGGATTGTGTATCAGGATGGAGATGGAAGCCAGCTTGACAATGGAGTTTTAGAATTTGACAGAGGCACTGCTCGTGTGGGTAAAGGAAGACAAGCTAAAGGCACCAAGCATTTTGCCACTGAGAAACAAAGAAGAGAACAACTCAATGGCAAATACAATGTCTTGAGGAGTCTGATTCCGAGCCCCACCAAGATGGATAGAGCATCTGTGGTGGGAGATGCCATTAACTATATTAAAGAGCTGATGAGAACAGTGAATGAGCTGAAATTGTTGGTGGAGAAGAAAAGGTTTGGAATGGACAGATGCAAGAGGCAGAAAGCAGAAGATGATGGTGGAGAGAGCTGTAACATGAAGCCCTATGGTGATCATCATCCAGAAGGATGCATAAGGACCTCATGGCTACAGAGGAAATCCAAAGACACTGAGGTTGATGTCCGGATCATCGACGACGAAGTCACAATCAAACTCGTTCAGAGGAAGAAGATCAGCTGCTTGCTGTTTGTCTCCAGGGTTCTTGATGAACTCCAGCTGGATCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAACAGCAAGATATGTGAAGGTTCTTCAGTGTATGCAAGCGCCATAGCAAACAAGGTGATTGAGGTTTTGGACAGGCAGTATGCAGCAGCTGTTCCACACACTGCCAGCAGCTATTAA 1476 0.4648 MYEHTSSFDPNTMADGTVSLKDGLPDAPQFMAAGNLTSSNNNLDENLKLTVEELSYHQHQNHPPPHPEDVSAFANGVAAAAASPLDISHPQHLVLNVENPYNSETLVHQVMDVLNYDQSTWDPKIQEFQGVNYSNHYHQEQQQPQQFHQIETQSHNSFSILDPPPPYPPSNLLDLLHYNPTQKIPNIPNSMGFLGDIPMGSDSTSACSVLYDPLLHLNLPPQPLALRELFQSLPRGYSLPTSSRNGSLFGGGDEIEGNGIVYQDGDGSQLDNGVLEFDRGTARVGKGRQAKGTKHFATEKQRREQLNGKYNVLRSLIPSPTKMDRASVVGDAINYIKELMRTVNELKLLVEKKRFGMDRCKRQKAEDDGGESCNMKPYGDHHPEGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSRVLDELQLDLHHVAGGHVGEYCSFLFNSKICEGSSVYASAIANKVIEVLDRQYAAAVPHTASSY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2326 491 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 339 IPR011598 GO:0046983
Alju04g2326 491 MobiDBLite consensus disorder prediction 1 20 - -
Alju04g2326 491 PANTHER TRANSCRIPTION FACTOR BHLH91 3 483 IPR045895 GO:0006355|GO:0048658
Alju04g2326 491 CDD bHLH_AtMYC1_like 295 356 IPR045896 -
Alju04g2326 491 SMART finulus 296 345 IPR011598 GO:0046983
Alju04g2326 491 Gene3D - 285 354 IPR036638 GO:0046983
Alju04g2326 491 Pfam Helix-loop-helix DNA-binding domain 293 339 IPR011598 GO:0046983
Alju04g2326 491 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 293 361 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2326 Alju-ChrAlju04 55686669 55688839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2326 1 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 37.002 1.87e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju04g2326 HLH 6.9e-11 No_clan