Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2289 ATGGCTCCCGCCGGAGCCACCGCCCTCCACTCTTCCCTCTGTAGCCTCTCTCCTCACAAACCATCGTCTCCAAATTCCCAGCAACCAAACACCCAATTGGGTCCCACCAAACCCAAAAGCCTCCTCCAAAAGCACCCACTTTATACCCCAACACATACCAAACTCTCCCTTGAATTCAAAGAAAAAATTCTCTGCCTTGAAATTATGGGTGTTGATTCAGGCAAGGCACTTTCAGTAAACCCAGATCTCAGAACTGCAACTATGGAATCCATACATTCCATTATCTCCTTCCTTCATTCCAAAGGCATTCAACAAAATGACTTGGCCAGAATTCTGGGTATGTGCCCTAAAATTCTCACCTCCAGCATAAAATCTGAACTTGGCCCTGTTTTTGATTTTCTCTCTCAGGACCTTGAAGTCCCAGATCGTAGCTTTAGGAAGGTCATTAACAAATGCCCAAGATTGCTCACTTCAAGTGTCAAAGACCAGCTCAAGCCAGCTTTGTTCTACCTTCAGAGGCTAGGGTTCAAGGATTTGTCAGCTTTGGCTTATCAAGATTCTGTCTTGTTGGTTTCTAATGTGGAAAGGACTCTGATTCCTAAACTGAAGTTTCTGGAGAATCTTGGGTTTTCAAAGGAAGAAACTAAAGATATGGTTTTGAGGTGCCCTACATTGTTGACTTTTAGTATTGACAATAATTTTCAGCCCAAGTTTGAGTTTTTTGCTGAGGTGATGAGGAAAAAGTTGGAGGAGCTTAAGGAGTTTCCTCAGTATTTTGCTTTTAGCTTGGAAAACAGGATTAAGCCAAGGCATATGGAAATTGTGAAAAGTGGGATTAATATGCCTTTGTCTCTGATGCTTAAGAGCACTGATGATGAGTTTAGGGAGCTCATCAAGCAGAAAACTGGTGGATGA 915 0.4273 MAPAGATALHSSLCSLSPHKPSSPNSQQPNTQLGPTKPKSLLQKHPLYTPTHTKLSLEFKEKILCLEIMGVDSGKALSVNPDLRTATMESIHSIISFLHSKGIQQNDLARILGMCPKILTSSIKSELGPVFDFLSQDLEVPDRSFRKVINKCPRLLTSSVKDQLKPALFYLQRLGFKDLSALAYQDSVLLVSNVERTLIPKLKFLENLGFSKEETKDMVLRCPTLLTFSIDNNFQPKFEFFAEVMRKKLEELKEFPQYFAFSLENRIKPRHMEIVKSGINMPLSLMLKSTDDEFRELIKQKTGG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2289 304 Gene3D Transcription termination factor 3, mitochondrial 122 302 IPR038538 -
Alju04g2289 304 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 SMART mt_12 109 141 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 SMART mt_12 74 104 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 SMART mt_12 216 247 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 Pfam mTERF 66 178 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 Pfam mTERF 189 294 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 FunFam Transcription termination factor MTEF1, chloroplastic 134 302 - -
Alju04g2289 304 PANTHER CGI-12 PROTEIN-RELATED 13 299 IPR003690 GO:0003690|GO:0006355
Alju04g2289 304 MobiDBLite consensus disorder prediction 12 38 - -
Alju04g2289 304 MobiDBLite consensus disorder prediction 12 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2289 Alju-ChrAlju04 55278613 55279527 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju04g2289 mTERF 1.1e-29 No_clan