Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2287 ATGTCGTCGTCTCGTACCGGTACCGGAACTTCTAGCGGTAAAACCCGCGTCGGAAAGTTCGAGCTGGGTCGGACTCTCGGTGAGGGCAATTTCGCCAAGGTAAAGCTTGCCCGGAATGTCGAGACCGGAGAAAATGTGGCGATCAAGATTATTGACAAGGACAAGATTCTCAAACACAAAATGGTTCGCCAGATAAAGCGAGAGATTTCAACAATGAAATTGATCAGGCACCCAAATGTCATACGCATGTATGAGGTGATGGCTAGCAAGACCAAGATATATATTGTACTAGAATTTGTGACTGGTGGGGAATTGTTTGATAAAATTGCAAGCAAGGGCCGGTTAAAAGAAGATGAAGCAAGAAAATATTTCCAGCAGCTTATATGTGCCGTAGATTATTGTCACAGTAGAGGTGTTTGCCATAGGGACCTAAAGCCTGAAAATTTGTTGCTGGATGCTAATGGAGGTCTTAAAGTTTCGGATTTTGGATTGAGTGCACTGCCTCAACAGCTTCGAGAAGACGGGCTGCTTCACACAACGTGTGGTACACCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGCTATGATGGCACCAAGGCAGATCTTTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTACTTGCCCTTTGAAGATACTAACATTATGGCTTTATATAAAAAGATCTTCAAGGCTGATTTCACATGCCCTCCTTGGTTCTCATCAAGTGCAAAGAAATTAATCAAGAGAATTCTTGACCCCAGTCCTGCTACACGAATAACGTTTGCTGAGGTCATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTCCTAGATTCGGGCAAGCTGATGTTAGTCTTGATGATGTAGATGCTATATTCAGTGAATCAGCGGATTCTCGAAATTTCGTTGTTGAAAGGCGAGAAGAGGCACCAGTGGCACCTATGGCACCTATGGCTATGAATGCTTTTGAACTTATCTCTACGTCTCAAGGGCTTAACCTTAGTAATCTTTTCGAGAAACAAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTCCAGCGAACGAGATAATTTCAAAAATTGAGCAAACGGCAACACCAATGGGTTTTGATGTTAGGAAGAATAACTACAAGTTAAAGCTTCAAGGGGAAAAGAGTGGACGCAAAGGACATCTATCTGTTGCGACTGAGATATTTGAGGTGGCCCCGTCACTTTGCGTGGTTGAGCTCCGCAAGTCTGGAGGAGATACGCTGGAATTTCACAAGTTCTACAAGAACCTATCTACGGGGCTGAAAGATGTTGTTTGGAAAGCAGAACCTATAGGTGAAGAAACAAATGGTGGTACTGCAAATGCATCAAGATAG 1389 0.4312 MSSSRTGTGTSSGKTRVGKFELGRTLGEGNFAKVKLARNVETGENVAIKIIDKDKILKHKMVRQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGGLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDTNIMALYKKIFKADFTCPPWFSSSAKKLIKRILDPSPATRITFAEVIENDWFKKGYVPPRFGQADVSLDDVDAIFSESADSRNFVVERREEAPVAPMAPMAMNAFELISTSQGLNLSNLFEKQMGLVKRETRFTSKCPANEIISKIEQTATPMGFDVRKNNYKLKLQGEKSGRKGHLSVATEIFEVAPSLCVVELRKSGGDTLEFHKFYKNLSTGLKDVVWKAEPIGEETNGGTANASR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2287 462 CDD STKc_SnRK3 19 274 - -
Alju04g2287 462 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Alju04g2287 462 CDD CIPK_C 326 441 - -
Alju04g2287 462 FunFam Non-specific serine/threonine protein kinase 13 315 - -
Alju04g2287 462 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Alju04g2287 462 Gene3D Kinase associated domain 1, KA1 323 445 - -
Alju04g2287 462 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2287 462 SUPERFAMILY Protein kinase-like (PK-like) 17 287 IPR011009 -
Alju04g2287 462 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Alju04g2287 462 Gene3D Transferase(Phosphotransferase) domain 1 11 322 - -
Alju04g2287 462 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 434 - -
Alju04g2287 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Alju04g2287 462 FunFam Non-specific serine/threonine protein kinase 319 445 - -
Alju04g2287 462 Pfam NAF domain 322 382 IPR004041 GO:0007165
Alju04g2287 462 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2287 462 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2287 Alju-ChrAlju04 55254709 55260888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2287 1 452 CBL-interacting serine-threonine protein kinases AT1G01140 68.341 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju04g2287 Pkinase 1.6e-75 CL0016