Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2271 ATGGAGGAGGATGGGATTCAAGCACAAGCGTGTAAATTCCCAAGAATTGAAAATGGAACTGCAAGAAACGATTCCTCCAACAACAACACCAAGATAGGTTCCAGTATTAACGAAGAAAATGGGGACCTCCTCAGAAAAAGAAGCGGCGGAGGAGGAGGCGGCGGCGGCGGCGGCGACGGAAGCAGCCACCGATTTCACAGCTGGCACCACCACTCGTCTCGAATCATTAGGGTTTCTCGTGCCTCCGGTGGGAAAGATCGGCACAGTAAGGTCATGACTTCCAAGGGTTTAAGAGACCGAAGGGTTCGTCTCTCTGTAACCACAGCGATTCAATTCTATGACCTTCAAGATCGTCTTGGTTATGACCAACCTAGTAAAGCTGTGGAATGGTTAATTAAAGCTGCCTCTGATGCAATTTCTGAGCTTCCTTCCCTGAACAATACCTTCCCTGAGACCCCAAAACAGCCCAGCGACGAGAAGAGGGGCGGTGAGAAATGTGGAATCGGTTCAGCTGATGCAGAAGAAGATGGTGAAGCTAGTTTCCACCACCACCACCACCACCACCACCAGAATCAGAACCAGAATCAGAGTCAGAATCAGAGCCAGAATCTTTCCTTGTCCAAGTCTGCTTGCAGTAGCACATCGGAGACGAGCAAAGGCTCCGGCGGCTTGTCCCTCTCGAGGTCAGAGATTCGGGTCAAGGCCCGCGAGAGGGCGAGGGAGAGAGCGGCCAAGGAGAAGGAGAAAGAGAATGATGAATGTGGCAATAATAATAATAATATTGCTCATCATCCCCATAATAATAATAACATTGTCATGTCCATGGCTCAAACTTCTTCCTTCACTGAGCTTCTTACAGGTGTACCTGCTGCGACTACTGGTCCCACCGGGTCGGGCCACCACCACCACCACCACCGGAGTGATGAGGCTGATCTGTTCAGCAAAGGAGCTAGACATCAATGGAATATAGCGCCGATGGACTACTTCGGCGCCGGGATTCTGGGAGGTTCTTCGTCAACGTCGGCTTCACGAACTGGCCAGCATCATCATCAATCTTCTGGGTTTTCAGGGCAGATCCAATTGGGGAACAATCTTGCTCACGCAATGTCGGTTGCACCACCGTTCGTAGTGCAAAGTGAAAACCAGCACTCAGATCAGCTTCAGCATTTCTCGTTCATCACCGACCATCTTATGCCGGCGGGGGTGGTGACGTCGACGTCATCGGCGTCTCAGGCCTCCAGTGGCGGCGGTGGGGGGAGCAGCGAGTACAATCTCAACTTCACAATCTCTTCTTCAAATTCCGGCGGCCTTGCTGGTTTCAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTACCTCATCATCTGCAGAGGTTCTCACCTTTAGACGGATCGTCCAACTTACCTTTCTTCATCGGAGCTGCCGCTGCCGCAGCTCCGGCCATGGAGAATCACCACCACCACCAACACCAACACCACCAACACCATCAGTTCTCGCCCGAACTAGACGGCCGCTTGCAACTCTGCTACGGCGACGGAAGCCAGCATTCAGACCAGAAGGGGAAGGGAAAGAACTGA 1584 0.5221 MEEDGIQAQACKFPRIENGTARNDSSNNNTKIGSSINEENGDLLRKRSGGGGGGGGGGDGSSHRFHSWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPETPKQPSDEKRGGEKCGIGSADAEEDGEASFHHHHHHHHQNQNQNQSQNQSQNLSLSKSACSSTSETSKGSGGLSLSRSEIRVKARERARERAAKEKEKENDECGNNNNNIAHHPHNNNNIVMSMAQTSSFTELLTGVPAATTGPTGSGHHHHHHRSDEADLFSKGARHQWNIAPMDYFGAGILGGSSSTSASRTGQHHHQSSGFSGQIQLGNNLAHAMSVAPPFVVQSENQHSDQLQHFSFITDHLMPAGVVTSTSSASQASSGGGGGSSEYNLNFTISSSNSGGLAGFNSRGTLQSNSPSLLPHHLQRFSPLDGSSNLPFFIGAAAAAAPAMENHHHHQHQHHQHHQFSPELDGRLQLCYGDGSQHSDQKGKGKN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2271 527 MobiDBLite consensus disorder prediction 143 266 - -
Alju04g2271 527 MobiDBLite consensus disorder prediction 508 527 - -
Alju04g2271 527 Pfam TCP family transcription factor 83 249 IPR017887 -
Alju04g2271 527 MobiDBLite consensus disorder prediction 483 502 - -
Alju04g2271 527 MobiDBLite consensus disorder prediction 192 225 - -
Alju04g2271 527 MobiDBLite consensus disorder prediction 230 254 - -
Alju04g2271 527 MobiDBLite consensus disorder prediction 338 358 - -
Alju04g2271 527 MobiDBLite consensus disorder prediction 1 73 - -
Alju04g2271 527 ProSiteProfiles R domain profile. 229 247 IPR017888 -
Alju04g2271 527 MobiDBLite consensus disorder prediction 154 182 - -
Alju04g2271 527 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 355 IPR005333 GO:0003700
Alju04g2271 527 MobiDBLite consensus disorder prediction 19 37 - -
Alju04g2271 527 Coils Coil 233 253 - -
Alju04g2271 527 ProSiteProfiles TCP domain profile. 84 142 IPR017887 -
Alju04g2271 527 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2271 Alju-ChrAlju04 55087580 55089163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2271 64 527 TCP Transcription Factor Family AT4G18390 41.478 5.59e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju04g2271 TCP 3e-41 No_clan