Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2263 ATGTATTACTCCTCAATTCATCCGCTTCTATCTTCTTCGTCACTTCCCCTGAACGACATCGTTTATGAAGATGAGAAGAAACTGCGACTTAGAACTTCGTCTTTTCCCTTCTCACGATTCCAGCCACAATCATCATCACCACCACCACCACCACCCCATGTAAGATCTAACCTATATCTTATCTTACTCATTTTGCTTTTTCTTGCTTCTGATTTTTGTTATCTCAGCTGGGTGGGAGAAGGGAATAATAACGAGAGAGAGATGAGTGCTGCAGAGGATGAAGGGCAGCAACAGAAGCTCACAATTTTCTATGATGGCAAGGTTTGCGTCTCGGATGTCACCCACCTTCAGGCGAGGTGGATAATGAAGGAAGCAAGCAACAAAGAAATGGCAGAGGAAGAGAAGATAATGATGAAGAGATCATTGAGTCAGAGTCATGACAGGGAGATGTATAACCCTAACAACAACAACAACACTTCACTTTCTATGAAGAGATCTCTCCAACGTTTCCTTCAAAAGCGCAAGGCTCGTATCCTCCATTCCTCCCCTTACTACCATCCTTAA 564 0.4344 MYYSSIHPLLSSSSLPLNDIVYEDEKKLRLRTSSFPFSRFQPQSSSPPPPPPHVRSNLYLILLILLFLASDFCYLSWVGEGNNNEREMSAAEDEGQQQKLTIFYDGKVCVSDVTHLQARWIMKEASNKEMAEEEKIMMKRSLSQSHDREMYNPNNNNNTSLSMKRSLQRFLQKRKARILHSSPYYHP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2263 187 MobiDBLite consensus disorder prediction 142 161 - -
Alju04g2263 187 Pfam tify domain 96 125 IPR010399 -
Alju04g2263 187 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 185 IPR040390 -
Alju04g2263 187 MobiDBLite consensus disorder prediction 147 161 - -
Alju04g2263 187 Pfam Jas motif 164 185 IPR018467 -
Alju04g2263 187 SMART tify_2 93 127 IPR010399 -
Alju04g2263 187 ProSiteProfiles Tify domain profile. 93 127 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2263 Alju-ChrAlju04 55021646 55023075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2263 96 185 Tify Gene Family AT1G30135 45.263 4.59e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju04g2263 tify 7.9e-12 No_clan