Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2258 ATGAAAAGATGGACAGAACCAGAAGAACTTGAAGCTGCAAGAATATCTGGAAGGGGTTTGACAAATGACATCGTTTATGAAGAAGATGAGGAGAAACTGCAACTTAGAACTTCGTCTTTTCCCTTCTCACGATTCCGGCCACAATCACCACCACCACCATCATCAATTGTGGGAGAAGGGAATAATAACAATAGCGAGAGAGAGATGAGTGGTGCAGAGGATGAAGGGCAGCAACAGAAGCTCACAATTTTTTATGATGGCAAGGTTTGCGTCTCGGATGTCACCCACCTTCAGGCGAGGTGGATAATGAAGCAAGCAAGCAAAGAAATGGCAGAGGAAGATAAGATAATGATGAAGAGATCATTGAGTCAAGGTCATGAGAGGGAGATGTATAGCCCAAACAACAACAACACTTCACTTTCTATGAAGAGATCTCTCCAACATTTCCTTCAGAAGCGCAAGGCTCGTATCCTCCATTCCTCCCCTTACTACCGTCCTTGA 501 0.4431 MKRWTEPEELEAARISGRGLTNDIVYEEDEEKLQLRTSSFPFSRFRPQSPPPPSSIVGEGNNNNSEREMSGAEDEGQQQKLTIFYDGKVCVSDVTHLQARWIMKQASKEMAEEDKIMMKRSLSQGHEREMYSPNNNNTSLSMKRSLQHFLQKRKARILHSSPYYRP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2258 166 SMART tify_2 74 108 IPR010399 -
Alju04g2258 166 ProSiteProfiles Tify domain profile. 74 108 IPR010399 -
Alju04g2258 166 MobiDBLite consensus disorder prediction 37 77 - -
Alju04g2258 166 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 39 164 IPR040390 -
Alju04g2258 166 Pfam Jas motif 143 164 IPR018467 -
Alju04g2258 166 Pfam tify domain 77 107 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2258 Alju-ChrAlju04 54893733 54899908 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2258 77 164 Tify Gene Family AT1G30135 46.465 1.61e-17 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju04g2258 tify 4.2e-12 No_clan