Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2254 ATGAAGATGAGAAGAAACTGCGACTTAGAACTTCGTCTTTTCCCTTCTCACGATTCCAGCCACAATCATCACCACCACCACCACCCCATGGTGGGAGAAGGGAATAATAACGAGAGAGAGATGAGTGCTGCAGAGGATGAAGGGCAACAACAGAAGCTCACAATTTTTTATGATGGCAAGGTTTGCGTCTCTGATGTCACCCACTTTCAGGCGAGGTGGATAATGAAGGAAGCAGGCAAAGAAATGGCAGAGGAGGAGGAGAACATGATGAAGTTGAACAGATCATTGAGTCAATCTCAGAGGGAGATGTGTAGCCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACATCGTCACTTTCCATGAAGAGATCTCTCCAACGTTTCCTTCAGAAGCGCAAGGATCGTATTCTCCATTCTCCTCACCCTTACCATCCTTAA 459 0.4139 MKMRRNCDLELRLFPSHDSSHNHHHHHHPMVGEGNNNEREMSAAEDEGQQQKLTIFYDGKVCVSDVTHFQARWIMKEAGKEMAEEEENMMKLNRSLSQSQREMCSHNNNNNNNNNNNNNNNNTSSLSMKRSLQRFLQKRKDRILHSPHPYHP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2254 152 ProSiteProfiles Tify domain profile. 46 80 IPR010399 -
Alju04g2254 152 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 26 150 IPR040390 -
Alju04g2254 152 SMART tify_2 46 80 IPR010399 -
Alju04g2254 152 MobiDBLite consensus disorder prediction 17 47 - -
Alju04g2254 152 MobiDBLite consensus disorder prediction 95 125 - -
Alju04g2254 152 Pfam tify domain 49 78 IPR010399 -
Alju04g2254 152 Coils Coil 75 102 - -
Alju04g2254 152 Pfam Jas motif 129 150 IPR018467 -
Alju04g2254 152 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2254 Alju-ChrAlju04 54819266 54820563 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2254 1 151 Tify Gene Family AT1G30135 38.710 3.90e-22 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju04g2254 tify 5.6e-11 No_clan