Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2223 ATGGATCCTCTCAGTGGAGGTAACAATCCTGCCAACAACTCTAATCTCAGCTCAAAGCAACGTTTACGCTGGACGCATGAGCTGCATGAACGTTTTGTTGATGCCGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGGGTTATGGGTGTGCAAGGCCTAACAATATATCATGTCAAAAGCCATTTACAGAAATATCGGCTTGCAAAATACCTCCCTGATTCCTCATCTGATGGAAAAAAAGCCGAAAAGAAAGAAATGGGTGACATGCTTTCCAATCTAGACGGATCTTCTGGTGGGATACAAATTACTGAAGCACTGAAGCTACAGATGGAGGTGCAGAAGCGACTGCATGAGCAATTAGAGGTTCAGAGACAACTTCAACTACGGATAGAAGCTCAGGGTAAATACCTGAAGAAGATAATTGAAGAGCAGCAGCGGCTCAGTGGGGTTCTGTCTGACTCACCTTGCTCAGGTGTTGATGCTGTGGCATCGGCCGATGGATGTCAAGAACCAGAGAACAAGACTGACCCGGCTACCCCGGCTCCAACCTCTGAGTGCCCCCTCCAAGATAAAGCAGCAAAAGAACGTGCCCCAGCAAAGAGTCTGTCTATCGATGAATCGTTTTCATCTCACCACGAACCGTTGACTCCAGATTCTGGTTGCAATGGCGGCTCACCTATCGACAGCCCCGGAGGGGAGAGACTAATGAAGAAGCGCCGGGTCAGCATCGAGGGAGCATATTCTAAATCAGAAATGATGCTTCCACATCAGATACTAGAATCAAGCATGCCATCATACCAGCAGCCAAACAATGTTTTCCTCACCGGAGAGCAGTTTGATCCTTCATTGGGCATGTCCAGTAGGAGTGATGAGGCATTACAAAAGGTTGGTGGCAACAATCTGTGA 924 0.4827 MDPLSGGNNPANNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKAEKKEMGDMLSNLDGSSGGIQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSDSPCSGVDAVASADGCQEPENKTDPATPAPTSECPLQDKAAKERAPAKSLSIDESFSSHHEPLTPDSGCNGGSPIDSPGGERLMKKRRVSIEGAYSKSEMMLPHQILESSMPSYQQPNNVFLTGEQFDPSLGMSSRSDEALQKVGGNNL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2223 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 299 IPR044848 GO:0003700
Alju04g2223 307 FunFam Myb family transcription factor 18 76 - -
Alju04g2223 307 Coils Coil 109 129 - -
Alju04g2223 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Alju04g2223 307 MobiDBLite consensus disorder prediction 156 240 - -
Alju04g2223 307 Pfam MYB-CC type transfactor, LHEQLE motif 106 152 IPR025756 -
Alju04g2223 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 74 IPR006447 GO:0003677
Alju04g2223 307 MobiDBLite consensus disorder prediction 275 307 - -
Alju04g2223 307 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Alju04g2223 307 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Alju04g2223 307 Gene3D - 18 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2223 Alju-ChrAlju04 53964086 53966798 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2223 54 307 G2-like Transcription Factor Family AT2G01060 64.202 9.09e-99 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju04g2223 Myb_DNA-binding 1.9e-08 CL0123