Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2210 ATGCTGGTTTATGAGAGTGTCCCTAATGGTACTTTATATGATACCATCTCAGGGAAATCAGGACTTAGATTGGACTGGCCTAGAAGGCTAAAGGTAATCCTTGGTGCTGCTAAAGGCTTAGCTTATCTTCATGATCATGCGAATCCTTGTATCATACATAGGGACATCAAGTCAAGTAACATTTTGCTGGATGATCACTTAAAAGCCAAAGTAGCTGACTTCGGGCTTTCCAAGACTATGGTTGATTGTGACAAAGATCATATCACCACTCAAGTTAAAGGAACAATGGGCTATTTAGATCCAGAGTATTACACGACTCAACGTTTGACTGAAAAGAGCGATGTTTACAGCTTTGGAGTTCTAATGCTCGAGATGATAACTGCAAGAAAACCTATAGAGAAAGGGAAATACATTGTGAAAGTGGTTAGGAATTCAATTGATAGAGCAAAGGAGTTATATGGTCTTGAAGAAATTATTGACCCAGTGATTGGTTCAGAACCATCAATACTGAAGGGTTTAGAGAACTTTGTGGATCTCTCAATGAAGTGTCTTCAAGAGACAGGTGGTGACAGGCCTTCAATGAATGATGTGGTAAAAGAAATTGAAAGCATTTTGCTGATAGCTGGTTTGAACAACACTTCTGGTTCAATAGCAGCATCTGTTTCAACTTCTTTTGATGTGATAACAAGAGGGAGTTCTCAGAATCTTTCCAGTAATGACTCTTTTGATTCAGGTGTAGTACCCCTGCGACCAAAAATTGAGCTCAAGTAA 771 0.3917 MLVYESVPNGTLYDTISGKSGLRLDWPRRLKVILGAAKGLAYLHDHANPCIIHRDIKSSNILLDDHLKAKVADFGLSKTMVDCDKDHITTQVKGTMGYLDPEYYTTQRLTEKSDVYSFGVLMLEMITARKPIEKGKYIVKVVRNSIDRAKELYGLEEIIDPVIGSEPSILKGLENFVDLSMKCLQETGGDRPSMNDVVKEIESILLIAGLNNTSGSIAASVSTSFDVITRGSSQNLSSNDSFDSGVVPLRPKIELK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2210 256 SMART serkin_6 2 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2210 256 PIRSF ILK 1 212 - -
Alju04g2210 256 PANTHER OS01G0750732 PROTEIN 1 209 - -
Alju04g2210 256 SUPERFAMILY Protein kinase-like (PK-like) 1 211 IPR011009 -
Alju04g2210 256 Pfam Protein kinase domain 2 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2210 256 Gene3D Transferase(Phosphotransferase) domain 1 7 213 - -
Alju04g2210 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Alju04g2210 256 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 7 216 - -
Alju04g2210 256 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2210 Alju-ChrAlju04 53860762 53862581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2210 1 248 Receptor kinase-like Gene Family AT5G49760 56.855 2.36e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju04g2210 Pkinase 2.6e-31 CL0016