Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2208 ATGATGGGTGGAAGAACACTGGTATCCCTCCTGCTTGTCTGCAATTATTTGCTGCTAGCAGTAGCAGAAACTGCTAATGAGGATTGGGTTGCTCTGAGTTCTCTTATGGATACCTGGCAGAACACACCTCCCAACTGGGTGGGATCTGATCCTTGTAATGATTGGGATGGAATTAAGTGCACCAATTCACACGTTATTTCCATATCGTTATCAAGCATAGATTTGGCAGGCCAACTTTCTGGAGATATTGGATCACTATCTGAATTAGAGACCTTGGATTTGTCGTCCAACAAGGGCTTGACAGGATCTCTTCCTCGAACGATTGGAAATTTGAAGAATCTGTCAACCTTAATTCTTGTTGGTTGTAGTTTCAATGGTCCTATCCCAGAAGAAATAGGAAATCTGCGGGAGCTCCTCTTCCTATCTTTAAATTCCAATAAGTTTTTTGGACGAATTCCAGCTTCTATTGGTAATCTATCTAAACTTCATTGGTTAGATTTAGCTGACAATCAGCTTGAAGGACCCATCCCAGTATCTAATGGCAGTAAGCCTGGTCTTGATATGCTCTATGAAGCAAAGCATTTTCATTTTGGCAACAATAAGCTCTCAGACCCCATTCCTCCTGAGCTTTTTAGCTCGAAAATGACTTTGATTCATGTGCTTTTTGAAGGTAATCAACTCAGTGGAAGCATCCCATCTACAATTGGACTTGTTCAGAGTCTGGAGGTGGTGCGTCTCGACAGTAATGTTCTAAGCGGGCCGGTGCCTTCAAACATCAGCAACCTTGTGAATGTTCAAGACATGTACTTGTCCAACAATAAGCTTTCAGGATCCCTGCCAAACCTTGCTGGAATGAGGGTCCTCAGCTACATGGATATCAGCAATAATAGCTTCAATTCATGGGAATTTCCATCATGGTTATCAACTATGCAGTCCCTAACAGTGTTAAAGATGGAGAACACACAACTTCAAGGACAGATCTCTTCTTCTTTCTTTAACCTTCCCAATTTACAGACCGTGGTTTTGAAACGTAATGAACTAAATGGAACCTTGGACATTGGCACCACCTACAGCAGCCAGCTGCAACTCATTGACTTGCAGAGTAATAAAATTGAGAAGCTTGGCCAAAATAATGGGGCCCCCAAAGTCAAGATAATACTCAAAGATAACCCAATTTGTGACGAAAATGGAAAGGCATCAGAGAATTACTGCTCCAATTCCCAACCCAGTGATAACCTATATAAAACACCATCTAATAACTGTGAGCCTGGTGCCTGTAGTTTAGAACAGCTTCCTAGCCCCAATTGCCAATGCTCTTATCCATATACAGGAACTTTATTTTTCAGAGCACCTTCCTTCTCAGACTTGGGAAACAACACTCACTATACAACCCTTGAGGAGTCTCTTATGCATTCTTTTCAAGTTCATTATCTTCCTGTGGATTCAGTTTCTCTGACCCATCCAATCAAGGATTCAAGTCAGTATCTTGAATTGAGCTTACAAGTCTTCCCATCAAGTGAAGATCACTTCAATCGAACTGGGACTTCTAGCATTGGTTTTATGCTAAGTAATCAGACATTTAAGCCTCCTAAACAGTTTGGACCATTTTACTTTCGTGCAGACAAATATGGGCACTTTGGATCTGGGAAGACTAGTAAATCATCAAACATTGGCATCATAATAGGAGCAACAGTTGGTGGTTCAATCCTGCTAGTGTTGTTACTCCTCGCTGGTGTTTATGCTCGCTTCCAAAAGAAGAGAGCAGAAAAAGCAATTGACTACAACAATCCTTTTAAACGCTGGGATAGTGAGAGTGGTATCCCTCAGTTGAAAGGAGCAAAGCAGTTCTCATTTGAAGAAATTAAAAAGTGCACTACAAATTTTTCTCAAGCTAACGAGATTGGAACTGGTGGCTATGGGAAGGTTTATAAGGGAACTCTTCCAAATGGACAACCGATAGCCATAAAACGAGCTCTAAAAGAATCTATGCAAGGAGCATTTGAATTTAAAGCAGAGCTTGAACTTCTATCTAGAGTCCACCATAAGAATCTTGTTAGTCTTGTAGGATTCTGCTTTGATAAGGGAGAACAAATGCTTGTCTATGAGTATGTATCAAATGGGAGTCTGAAGGATACTCTCTCAGGGAGATCAGGATTTAAATTGGATTGGATCAGAAGGCTAAAAATTGCCCTCGGTACTGCCAGGGGTTTGGCTTATCTTCATGAACATGCCAACCCTCCTATCATACACAGGGACATCAAATCAAACAATATTTTACTGGATGAGCGCTTGAATGCTAAGGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATACTGAAAAAGACCATATAACCACTCAAGTTAAAGGAACAATGGGCTATTTGGATCCAGAGTATTATATGTCTCAACAATTAACAGAGAAGAGTGATGTTTACAGCTTCGGAGTGCTATTGCTGGAGCTTATAACTGCGAGAAAACCTCTAGAAAGAGGGAAATATATAGTAAAAGAGATCAAGAGTGCAATTGATAAGAAGAAAGATTTGTGTGGTCTTTATGAATTCCTGGACCCCAAAATGGATTTAGGGTCAACACTGATTGGTATTGAGCAGTATGTGAGTCTTGCAATGAAATGTGTGGAGGAGGCAGGTTCTAACAGGCCTCCAATGAGTAATGTGGTGAAAGAGATTGAAAACTTGTTGCTGTTGGCTGGTGCTAACCCTAATGCTGAATCAGCATCCACGTCAGCTAGTTATGAGGATATTAGTAAAGGAAGTTCTCATCATCCTTACAGCAATGAGTCCCTTGAGCCTATGTAA 2820 0.4092 MMGGRTLVSLLLVCNYLLLAVAETANEDWVALSSLMDTWQNTPPNWVGSDPCNDWDGIKCTNSHVISISLSSIDLAGQLSGDIGSLSELETLDLSSNKGLTGSLPRTIGNLKNLSTLILVGCSFNGPIPEEIGNLRELLFLSLNSNKFFGRIPASIGNLSKLHWLDLADNQLEGPIPVSNGSKPGLDMLYEAKHFHFGNNKLSDPIPPELFSSKMTLIHVLFEGNQLSGSIPSTIGLVQSLEVVRLDSNVLSGPVPSNISNLVNVQDMYLSNNKLSGSLPNLAGMRVLSYMDISNNSFNSWEFPSWLSTMQSLTVLKMENTQLQGQISSSFFNLPNLQTVVLKRNELNGTLDIGTTYSSQLQLIDLQSNKIEKLGQNNGAPKVKIILKDNPICDENGKASENYCSNSQPSDNLYKTPSNNCEPGACSLEQLPSPNCQCSYPYTGTLFFRAPSFSDLGNNTHYTTLEESLMHSFQVHYLPVDSVSLTHPIKDSSQYLELSLQVFPSSEDHFNRTGTSSIGFMLSNQTFKPPKQFGPFYFRADKYGHFGSGKTSKSSNIGIIIGATVGGSILLVLLLLAGVYARFQKKRAEKAIDYNNPFKRWDSESGIPQLKGAKQFSFEEIKKCTTNFSQANEIGTGGYGKVYKGTLPNGQPIAIKRALKESMQGAFEFKAELELLSRVHHKNLVSLVGFCFDKGEQMLVYEYVSNGSLKDTLSGRSGFKLDWIRRLKIALGTARGLAYLHEHANPPIIHRDIKSNNILLDERLNAKVADFGLSKSMVDTEKDHITTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLLLELITARKPLERGKYIVKEIKSAIDKKKDLCGLYEFLDPKMDLGSTLIGIEQYVSLAMKCVEEAGSNRPPMSNVVKEIENLLLLAGANPNAESASTSASYEDISKGSSHHPYSNESLEPM 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2208 939 Gene3D Phosphorylase Kinase; domain 1 600 703 - -
Alju04g2208 939 SMART serkin_6 628 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2208 939 Gene3D Transferase(Phosphotransferase) domain 1 704 916 - -
Alju04g2208 939 SUPERFAMILY Protein kinase-like (PK-like) 614 911 IPR011009 -
Alju04g2208 939 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Alju04g2208 939 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Alju04g2208 939 Pfam Protein kinase domain 629 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2208 939 ProSitePatterns Protein kinases ATP-binding region signature. 634 660 IPR017441 GO:0005524
Alju04g2208 939 Gene3D Ribonuclease Inhibitor 186 411 IPR032675 -
Alju04g2208 939 FunFam Leucine-rich repeat protein kinase family protein 594 703 - -
Alju04g2208 939 MobiDBLite consensus disorder prediction 911 939 - -
Alju04g2208 939 CDD STKc_IRAK 634 900 - -
Alju04g2208 939 PANTHER RECEPTOR-LIKE PROTEIN 55 33 899 - -
Alju04g2208 939 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 704 913 - -
Alju04g2208 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Alju04g2208 939 ProSiteProfiles Protein kinase domain profile. 628 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2208 939 SUPERFAMILY L domain-like 45 384 - -
Alju04g2208 939 FunFam Leucine-rich repeat family protein 27 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2208 Alju-ChrAlju04 53792706 53800529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2208 2 937 Receptor kinase-like Gene Family AT5G49760 56.751 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju04g2208 Pkinase 6.1e-48 CL0016