Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2207 ATGAGTCTCACTCACAGCCATAGCCACAGCCACGACGACACCACCACCACGGCGGCCACTACCACAGCGGCCGCCGCGAAGCTCGACGACGGTCACGAGCTGGACATGGTGATGCCGGGCTTCCGATTTCACCCCACGGAAGAAGAACTCGTGGAATTCTACCTTCGCCGTAAGGTTGAGGGAAAACGTTTCAATGTTGAGCTCATCACTTTCCTTGATCTTTACCGCTATGACCCCTGGGAGCTTCCTGCGATGGCAGCGATTGGAGAGAAGGAGTGGTACTTCTATGTGCCGAGAGATCGAAAGTATCGGAACGGCGATCGTCCCAACCGAGTAACGACGTCGGGGTACTGGAAAGCCACCGGAGCAGATAGAATGATCAGGACTGAGAATTTCAGGTCGATTGGGCTCAAGAAAACCCTAGTTTTCTACACTGGTAAAGCTCCTAAAGGTATCAGAACCAGTTGGATCATGAACGAATATCGCTTGCCTCACCATGACACCGAACGATATCAAAAGGCTGAGATATCGCTGTGTAGAGTGTACAAGAGACCAGGAGTAGAAGACCATCCTTCACTTCCTCGTTCTCTGCCAACGAGGCCATCTTCTTCTTCAAGAGCTTCTTCACACTCTTCAGAAAAAAGCATCACTAAGCACAACACCGAAACGTTTCATCATCAGAGCAGCAACAACAACAACAACGTAGAATTTGGGGGACAAAGTACGATGATGACGATGATGATGAACAACTACAATCATCATCATCATCGAACGGATCATGAGCAGTTATTAGGAAAAAGCTCTTCAGATAATAATCAAGGGGTCTCTATAGCTCTTGGGCTTTCAAAACAAAGCAATAATATCATTAACCCTAATAATTCTTCAACTTCAACGTTAATGGCGGCTCCTCCATTTCCACTCATTGAGGACGAAGACTTACTGATGCTCACTAATATGGCAACGCATCCATTGTTGATGAAGCAAGCTCAAGCTTCTTCCTCCTCCTCCTTCTTCTTCACACTCCCTGGCTCTGTTACTAATTGTAATAATAATAATTCTTCTTCAGCTTCTTCATCAAACGTGGAGGATCTCAATAGGCTCTTGAGTTATAATCCGCTGCAACAATACTTCAACACCAACAATGATCCGACTCATCATCAACAACAGTTGTCTGATAATTTTCTGGTGCAACCTCAACTACCAACGGCTCTGATGATCAGTTCTTCGTCGTTGTCCCTGCCAACTTCTTCACTTCCATTAACGGCCACACCCACGACGACGACAACCACCACGACCAACTTGATCTCTGATAATAAACTGTGGGAGTGGAATAATCTCATCCCTGAGCCAAGTAGTAACAGAGAATACAGCAACATGTCCTTCAAGTAA 1389 0.4622 MSLTHSHSHSHDDTTTTAATTTAAAAKLDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDHPSLPRSLPTRPSSSSRASSHSSEKSITKHNTETFHHQSSNNNNNVEFGGQSTMMTMMMNNYNHHHHRTDHEQLLGKSSSDNNQGVSIALGLSKQSNNIINPNNSSTSTLMAAPPFPLIEDEDLLMLTNMATHPLLMKQAQASSSSSFFFTLPGSVTNCNNNNSSSASSSNVEDLNRLLSYNPLQQYFNTNNDPTHHQQQLSDNFLVQPQLPTALMISSSSLSLPTSSLPLTATPTTTTTTTTNLISDNKLWEWNNLIPEPSSNREYSNMSFK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2207 462 MobiDBLite consensus disorder prediction 187 236 - -
Alju04g2207 462 MobiDBLite consensus disorder prediction 1 20 - -
Alju04g2207 462 FunFam NAC domain-containing protein 35 46 187 - -
Alju04g2207 462 SUPERFAMILY NAC domain 37 184 IPR036093 GO:0003677|GO:0006355
Alju04g2207 462 MobiDBLite consensus disorder prediction 222 236 - -
Alju04g2207 462 MobiDBLite consensus disorder prediction 196 211 - -
Alju04g2207 462 Pfam No apical meristem (NAM) protein 39 163 IPR003441 GO:0003677|GO:0006355
Alju04g2207 462 Gene3D NAC domain 46 187 IPR036093 GO:0003677|GO:0006355
Alju04g2207 462 ProSiteProfiles NAC domain profile. 37 184 IPR003441 GO:0003677|GO:0006355
Alju04g2207 462 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 36 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2207 Alju-ChrAlju04 53758044 53760583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2207 35 207 NAC Transcription Factor Family AT5G39820 49.000 1.52e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju04g2207 NAM 1.5e-34 No_clan