Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2202 ATGTCTGAAAGGCGAATTTCTGATCCTAGCAAGCTTCATCTCAAGAAGAAGGACCTCACAAAAATTCGTAAAGCTGCTCGTGTGTTGAGGGATCCTGGTACGACGTCGTCCTGGAAGTCACCTCTTAGTTCCTCGAGATCCGTTACTGCTGCTTCTGCATGGAAGAGCAATTTCTACAGGGGAAAAGAGAATAGCATCTTCTTGTGCAACTGGGAGAATCGCAAATCATCAGGTAACAAGAGTGGAGCGGCAAAAAACTACGACGCAGAGGAAGAAGATGATGATGATGAGGATGCTGCTGCTACTGGTGGCGGCAACGATGGGTCTTCTTCATCTCTTCTGGGGAGTTTCGAGGATTCCTTGAGCGATGCTCGAGGTTGCGATTCGAAGAGAAACACTTACTTGCGAGATGGGAGACGTTCTTCTATTTTCCGATGTAGAGACGCTAATAATCTTTCTTCGGCCAGAAGAAAAATGGGCAGTATCAAGAGAAAGAGTAAAAAAACCAACACACATTTGGATACATCAAAATTTCGGCAACCAGAAACCAAGTTGGGTGGAAGGTTTGTAAATTCCAAGGCATTTCTAGAGGACTCAATTGAAGAGTCTGATGATAATGAAGATCACTGTAATTCTGAGGATTTAAGGCGAATTTTAGGGTCATCTCGTTTGCTGCTGAAACTCAGGCGTAAGAATTGGTCTCGTTCTTCCTCAAAGTTACTGAGAAGTAGCCGAACTGAGGACTCTTCTTATACTTATAGTACTCCTGCTTTATCAACCTGCTCTTATAATAGGTATGGTCGCTATAATTCAAGTACTGTTGGATCCTGGGATACCACTACAAGCTCATTGAATGATGGTGATGATGGGGTAGATGATCATTTGGATTTGCCTGGCCAGAGGGGATGCGGGATTCCTTGCTATTGGTCCAAGAGGACTCCAAGAAATAGAGGGATGTGTAGGAGTTGTTATTCCCCTTCTCTTTCAGAGACTTTGAGGAGAAAAGGAAGTAGCTTATTATGTGGAAGTCGAAGTATCTATACAAGACACCGAAGGTCCTTATCGAGCTCTAACAAGTGGAGAGTTTCTTCAAGGAGTGCTCAGGGTGTTCTTCCACTGCTCACCAGCAGTGGTGAAGTTAGAGGAGGGTCATCCGTAGGAACTGGAAGGAGCGATGATGAACTTTCCGCGAACTTAGGGGAACTTTATCTTGAAGGTTTAAGTAGGTTAGATGGAAGGAGATGGTCATCAAGTTGTAGGAGTCAAGATGGTTTGGAGATTGTGGCTGTAGAGGGGGAAAGGGATGAGGAAGGCACGCTAGAAAATGCTACGAGTTTCAGTCAGAAGTATAAGCCTATTTCCTTTGGTGACTTGATTGGCCAGAATATTGTTATTCAGTCACTCATGAATGCTATTTCAAGGGATAGAATTGCTCCCATTTATCTTTTCCAAGGTCCTCGTGGTACTGGTAAAACTTCAACAGCCAGAATTTTTGCTTCTGCCCTGAATTGCACTGCTCCTGATGTAAATAAGCCTTGTGGATGCTGCAGGAACTGCACTGATCTCAATTCTGGCAAGAGTAGGGACTTCTTGGAAGTTGATGGAACCAAAAAGGAAGGGATTGATAGTGTTAGATATCTGTTGAAAAGACTAGTAGGATCACCATCGGCCTCCTCACGATACAGTGTATTTGTTATAGATGAGTGTCACTTGCTTCCTTCTAAGACATGGCTGGCATTTCTGAAGTTTCTGAAAGAACCACCCAGTCGAGTTGTGCTCATATTTATAACGACTGATCTTGACAATGTACCACGGACAATACAGTCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGGTGATATTGTGGCCAGATTGAGGACACTATCTGCCGAGGAGAACCTGGATGTTGAAAAAGATGCGCTGGACCTTATTGCCATGAATGCAGATGGTTCACTTCAAGATGCAGAAACTATGTTAGAACAACTGAGTTTGCTGGGGAAAAGAATTACTACTTCACTTGTCAATGAGCTTGTGGGTGTTGTCTCGGATGAAAAACTGCTAGAGCTGTTGGAGTTAGCAATGTCATCAGATACCTCACAAACAGTGAAGAAAGCCAGAGAAGTGATGGATTCTGTGGCTGATCCAATGATTTTGATATCACAAATGGCATGCCTCATTATGGATATCATTGCTGGATCATATACTGTCATCGATGCCAAACCTAGTGATTCGTATTTTGGTGGACGAAGTTTGAATGAATCAGAGTTGGGGAGGTTAAAGCATGCTTTGAAGCTGCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCTAGTGAACACTCAACATGGTTCACAGCTACTCTGTTACAGCTTGGTTCAATGCCTTCACCAGATCTTACCCAGTCAGGTAGTGGCAGGGGACAGAGCTGCAAGACTTCTGAATATGATCCATCAAGTGCTTCAAGAGAAGCTACAGCTCCAAAGCATAGTTCAGATGTCAGATATATTTCTCGAATGTCAACATCCCCTGCATCCCAGCAACGACCTTTGAATGGCAATTCCAGACATCAATGGGATGTATCATCTAAGTCAGATGGTTTCAGTTCGAGTTCAAAGCCATCAAGTAGTCCATTTCTAGGGGACGATGATGCAACACCTGCTTCATCTGATGATCTTATTATTGGGAATATGATGTTAAGATGTGTTAATTCAGGGAAGTTGCATGATATCTGGGAAAGTTGTATAGGGAGGTGTCATTCTAAGACATTGAAGCTGCTGCTCCACAATCATGGAAAACTTGTATCTATTTGTGAAGTTGAAGGTGTTCTGGTTGTATATGTTGCATTCAGAGATAGAGATATTAAAATTAGGGCTGAAAGGTTTTTGAGTAGTATTACAAATTCAATGGAAATGGTACTCAGGTGCAATGTGGAGGTTAGAATTATTCACTTGCCAGATGGTGAAGGTGAAAATCTACCTGGTATCATGCAGGCAGGATCAACAATGGGAAGTGAGAGGCAAATAAAAAGAGACCGTGCAAATGAAAAAGGTAGTCATTCTAGTTTTCCTCCTTTGCTGGATGAAAACTTGCAGGCTATCATTGATTCATCAGATTTTGCTGTTGGAAGAAACGGTGTGAGAGAGAATGAACATGAAATTCCCACACAAAGAGTTGAATCTATTATACATGAGCAGAGGCTGGAAACTGCGTGGCTACGGGCTGTAGAAAAAGGTTCTCCGGGATCACTGAGTTATGCAAGACCTGAGAAGAATCAGGTCCTGCCTCAGGAAAATGTTATCTGTAAAGACCCAGTAGAGTCCATTGATTCAGCAAGGTTTTCCTCTCAGCGTCCGGAAGATGATCTTCATCATGAAGTCAAAGTTTTGAAAGTTAAACATGGAAGAATTATGCAAAATGGTCAGATTAGTAGAAATGGAGCCCGATGTCCCATGTCTCCAAGTTTATTGCATGGTAACAGTTTAGCATCAAAGTCCAACAAAGAAAATCTGGGATACGAGTCAGGCTCCGGAGCTGGAGGTTGCATAGGACTTTTGTGTTGGAATAACTGCAAGCGTAGAAGGGAAAAGGTTAAAACACAAAAGGTTGGACATTTTACATTATTTAGTGACTGTGGTAAGTCAATGAAAAAGGAGGTCAAAAGGTAA 3672 0.4251 MSERRISDPSKLHLKKKDLTKIRKAARVLRDPGTTSSWKSPLSSSRSVTAASAWKSNFYRGKENSIFLCNWENRKSSGNKSGAAKNYDAEEEDDDDEDAAATGGGNDGSSSSLLGSFEDSLSDARGCDSKRNTYLRDGRRSSIFRCRDANNLSSARRKMGSIKRKSKKTNTHLDTSKFRQPETKLGGRFVNSKAFLEDSIEESDDNEDHCNSEDLRRILGSSRLLLKLRRKNWSRSSSKLLRSSRTEDSSYTYSTPALSTCSYNRYGRYNSSTVGSWDTTTSSLNDGDDGVDDHLDLPGQRGCGIPCYWSKRTPRNRGMCRSCYSPSLSETLRRKGSSLLCGSRSIYTRHRRSLSSSNKWRVSSRSAQGVLPLLTSSGEVRGGSSVGTGRSDDELSANLGELYLEGLSRLDGRRWSSSCRSQDGLEIVAVEGERDEEGTLENATSFSQKYKPISFGDLIGQNIVIQSLMNAISRDRIAPIYLFQGPRGTGKTSTARIFASALNCTAPDVNKPCGCCRNCTDLNSGKSRDFLEVDGTKKEGIDSVRYLLKRLVGSPSASSRYSVFVIDECHLLPSKTWLAFLKFLKEPPSRVVLIFITTDLDNVPRTIQSRCQKYLFNKIKDGDIVARLRTLSAEENLDVEKDALDLIAMNADGSLQDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTSQTVKKAREVMDSVADPMILISQMACLIMDIIAGSYTVIDAKPSDSYFGGRSLNESELGRLKHALKLLSEAEKQLRTSSEHSTWFTATLLQLGSMPSPDLTQSGSGRGQSCKTSEYDPSSASREATAPKHSSDVRYISRMSTSPASQQRPLNGNSRHQWDVSSKSDGFSSSSKPSSSPFLGDDDATPASSDDLIIGNMMLRCVNSGKLHDIWESCIGRCHSKTLKLLLHNHGKLVSICEVEGVLVVYVAFRDRDIKIRAERFLSSITNSMEMVLRCNVEVRIIHLPDGEGENLPGIMQAGSTMGSERQIKRDRANEKGSHSSFPPLLDENLQAIIDSSDFAVGRNGVRENEHEIPTQRVESIIHEQRLETAWLRAVEKGSPGSLSYARPEKNQVLPQENVICKDPVESIDSARFSSQRPEDDLHHEVKVLKVKHGRIMQNGQISRNGARCPMSPSLLHGNSLASKSNKENLGYESGSGAGGCIGLLCWNNCKRRREKVKTQKVGHFTLFSDCGKSMKKEVKR 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2202 1223 Gene3D - 621 682 - -
Alju04g2202 1223 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 448 852 - -
Alju04g2202 1223 CDD HLD_clamp_pol_III_gamma_tau 619 682 IPR045085 -
Alju04g2202 1223 SMART AAA_5 477 638 IPR003593 GO:0016887
Alju04g2202 1223 MobiDBLite consensus disorder prediction 33 51 - -
Alju04g2202 1223 MobiDBLite consensus disorder prediction 796 828 - -
Alju04g2202 1223 FunFam DNA polymerase III subunit gamma/tau 441 618 - -
Alju04g2202 1223 Gene3D - 437 617 IPR027417 -
Alju04g2202 1223 MobiDBLite consensus disorder prediction 1002 1024 - -
Alju04g2202 1223 MobiDBLite consensus disorder prediction 76 115 - -
Alju04g2202 1223 FunFam DNA polymerase III subunit gamma/tau 620 682 - -
Alju04g2202 1223 Pfam DNA polymerase III, delta subunit 460 619 - -
Alju04g2202 1223 CDD AAA 459 616 - -
Alju04g2202 1223 MobiDBLite consensus disorder prediction 836 884 - -
Alju04g2202 1223 MobiDBLite consensus disorder prediction 796 886 - -
Alju04g2202 1223 NCBIfam DNA polymerase III subunit gamma/tau 445 793 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Alju04g2202 1223 MobiDBLite consensus disorder prediction 23 51 - -
Alju04g2202 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 666 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2202 Alju-ChrAlju04 53686317 53692228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2202 439 734 Core DNA Replication Machinery Family AT1G21690 24.183 2.10e-11 65.1